On Fri, 29 Sep 2000, Lu�s Silva wrote:

> For a certain variable I applied a Three Factor ANOVA and found a
> significant interaction between two factors. 

Was this the only significant effect, or were there others? 
Actually, it would be easier to address your question usefully if 
you'd supply the eight means (and the ANOVA summary table).

> I have two levels for each factor.  Then, I applied the HSD Tukey test 
> for multiple unplanned comparisons, in order to detect what are the 
> significantly different treatments.

OK so far, although "I applied the HSD Tukey test" is not very 
informative.  (One cannot tell whether you applied it correctly, for 
example, let alone completely.)

> Since I detected an interaction between two factors, is it correct to 
> apply Tukey test? 

Sure.  Why wouldn't it be?  If the three factors are all fixed, there 
isn't even any quibble to be made about what the proper error mean square 
is for the test.

> If not, are there other type of unplanned comparisons that might be 
> used? 

The Scheffe' method comes to mind.  For pairwise comparisons, Tukey's 
method is said to yield narrower confidence intervals;  for more complex 
contrasts, Scheffe' intervals are narrower.  (All other post hoc 
comparison methods that I know of either are designed explicitly for 
pairwise comparisons, or are customarily applied only to pairwise 
comparisons (as is the case with Tukey's method).  Pairwise comparisons, 
in my experience, are often too simple-minded to convey a decently clear 
picture of what's going on in the data.) 
         When you're dealing with an interaction, particularly in a 2**k 
design, it may well be parsimonious to analyze the pattern of means in a 
series of complex, preferably orthogonal, contrasts, rather than in terms 
of the stereotypical main effects and interactions.  Can't tell without 
seeing the results. 
                        -- DFB.
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 Donald F. Burrill                                    [EMAIL PROTECTED]
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 Department of Mathematics, Boston University                [EMAIL PROTECTED]
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