I have a test that indexes some data, does an aggregation + search to 
verify the results.
Then my test changes 1 piece of data and re-indexes (everything).
refresh() is called.

Then I do an aggregation + search again to verify my results.
The search results are correct (ie updated to reflect the changed data).
The aggregation results are not correct - they are the same as the first 
aggregation results - implying the data has not changed.
The aggregation results go wrong at the result of a filter aggregation. The 
results of the filter aggregation give a count of 2 - the results of the 
search (equiv query or *same* filter) give 1.

Suspecting a caching issue (e.g. filter caching) I then made sure I flushed 
the caches for that index. But sadly, the problem still persists.

I am kinda  running out of ideas. Can anyone suggest what to check next?

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