I don't use aquamacs too much with org, but I just tried what you
describe, with aquamacs 1.5 (gnu emacs 22.3.2 from M-x emacs-version)
the latest org via git, and did not have that behavior.

I run aquamacs with 
  (setq one-buffer-one-frame '())

Do you already do this? If not, you might see if that avoids your issue.

--Greg

--
Gregory T. Sullivan, Ph.D.
BAE Systems Advanced Information Technologies
6 New England Executive Park, Burlington, MA 01803
781-262-4553 (office),  978-430-3461 (cell)
gregory.sulli...@baesystems.com 


-----Original Message-----
From: emacs-orgmode-bounces+gregory.sullivan=baesystems....@gnu.org
[mailto:emacs-orgmode-bounces+gregory.sullivan=baesystems....@gnu.org]
On Behalf Of Robert Goldman
Sent: Saturday, December 13, 2008 5:31 PM
To: emacs-orgmode@gnu.org
Subject: [Orgmode] Is this an aquamacs bug?

I use org on aquamacs and it behaves badly with the agenda.  Here's the
problem:

1.  I have an agenda view with a todo task under the cursor.

2.  I press "t" to toggle the todo state

3.  I change the todo state to a different one

4.  Aquamacs pops forward the emacs frame containing the org file from
which the todo is taken.

5.  I am left with focus moved to the wrong frame.  I have to mouse back
to the agenda frame now in order to keep working.

I *suspect* that this is an aquamacs specific problem, but would be
obliged if someone could confirm that.  If so, I will work with the
Aquamacs crew to get this fixed.

Thanks!


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