On 12 Apr 2006, at 10:09, Christiane Nerz wrote: > Hi all, > > I put the gb-file of an whole genome in Artemis. > Is there a possibility to export a multi-FastA-file with the bases of > all ORFs?
If you can save the file out of Artemis with the ORFs shown in the feature table then you can use coderet in EMBOSS to extract out all of the subsequences covering those features, either as protein or DNA. Hope this helps Simon. -- Simon Andrews PhD Bioinformatics Dept. The Babraham Institute [EMAIL PROTECTED] +44 (0) 1223 496463 _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
