Hi, > I want to use the package called 'Antigenic' in EMBOSS. > I am not quite clear about the input file format to be used. pls consult EMBOSS documentation on the system by typing $tfm antigenic
> How can I input a fasta file to the program? first check: tfm antigenic then, assuming that ur set of sequence(s) are in a textfile(myseqs.fa) in fasta format run: $antigenic -sequence myseqs.fa > is it possible to use a text file that has the amino acid sequence in a fasta > format? yes >In which folder should the file be? simple solution would be that the sequence current folder regards, KM _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
