Take a look at the web site, http://emboss.sourceforge.net. There are a number of web interfaces available. They all have different strengths/weaknesses, so decide upon what it is you are looking for - that should help you choose one.
> -----Original Message----- > From: [EMAIL PROTECTED] > [mailto:[EMAIL PROTECTED] On Behalf Of Guy Bottu > Sent: Sunday, November 05, 2006 2:16 PM > To: Miguel Ortiz Lombardia > Cc: [email protected] > Subject: Re: [EMBOSS] using emboss programs from spin] - > Checked by AntiVirDEMO version > > > On Thu, Nov 02, 2006 at 09:00:20AM +0100, Miguel Ortiz > Lombardia wrote: > > -----BEGIN PGP SIGNED MESSAGE----- > > Here, a number of users are quite afraid of the command line ;-{ so > > they would appreciate a graphic interface to EMBOSS. We > tried Jemboss > > first, but got a number of problems that we couldn't solve > > (essentially with some results text files being corrupted). Then, I > > met with this interface from the Staden package, and found it very > > useful, to a certain extent. > > Dear Miguel, > > If you want a GUI for EMBOSS another possibility is wEMBOSS, > a Web interface with > the user data permanently stored at the side of the server. A > version that fully > supports EMBOSS 4 is just out (see http://wemboss.sourceforge.net). > > However, I consider that Staden spin remains useful. When I > personally have to do > some bioinformatic analysis with EMBOSS, I usually work at > the command line. But for > programs that produce an XY-graph I use spin, because it has > this nice feature of > displaying in one window a zoomable graph and in another > window the sequence, > allowing to see which detail of the graph corresponds to > which range of the > sequence. > > Regards, > Guy Bottu, > BEN > > _______________________________________________ > EMBOSS mailing list > [email protected] > http://lists.open-> bio.org/mailman/listinfo/emboss > _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
