Thanks Ryan and others. The new emboss-explorer takes care of this. Sumit
Ryan Golhar wrote: >>-----Original Message----- >>From: [EMAIL PROTECTED] >>[mailto:[EMAIL PROTECTED] On Behalf Of Jean Mao >>Sent: Friday, November 03, 2006 6:56 AM >>To: 'Guy Bottu'; Sumit Middha >>Cc: [email protected] >>Subject: Re: [EMBOSS] Emboss-explorer error - Checked by >>AntiVir DEMOversion - >> >> >>Is there a temporary solution that I can do to EMBOSS-4.0.0 >>to fix the datatype errors instead of waiting for solution >>from Luke? I sent several emails to him but got no response >>at all for a long while. Thank you very much! >> >>Jean >> >> > > >I have a fix to this: > >In the XHTML.pm file, located in >/usr/lib/perl5/site_perl/5.8.0/EMBOSS/GUI, you can apply this patch: > >---BEGIN--- >--- XHTML.pm 2006-11-10 23:38:31.000000000 -0500 >+++ /usr/lib/perl5/site_perl/5.8.0/EMBOSS/GUI/XHTML.pm 2006-11-10 >23:41:34.000000000 -0500 >@@ -955,6 +955,10 @@ > &_acd_infile; > } > >+sub _acd_pattern { >+ &_text_field_html; >+} >+ > sub _acd_sequence { > my ($self, $param) = @_; >---END--- > >Basically, add the function _acd_pattern to XHTML.pm. I can email you a >fresh copy of XHTML.pm if you would like instead of applying a patch. >I'll post this fix up on sourceforge as well. > >Ryan > > > > _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
