Hello, dear Sirs!
The other day I have install the EMBOSS package (version for windows). Environmen parameters are setted as required: SET EMBOSS_ROOT=D:\Emboss-MS SET EMBOSS_ACDROOT=D:\Emboss-MS\acd SET EMBOSS_DATA=D:\Emboss-MS\data Please, help me to solve a problem. Why no one's of utilities (seqret, dottup and others) do not desire work with known databases. showdb return: # Name Type ID Qry All Comment # ============ ==== == === === ======= pir P OK - - PIR from the EBI sw P OK - - SWISSPROT from the EBI swissprot P OK - - SWISSPROT from the EBI uni P OK - - UNIPROT from the EBI uniprot P OK - - UNIPROT from the EBI em N OK - - EMBL from the EBI emblebi N OK - - EMBL from the EBI gb N OK - - GenBank from Infobiogen genbank N OK - - GenBank from Infobiogen refseq N OK - - REFSEQ from EBI but if I try exec: seqret emblebi:xlrhodop than get messages: Reads and writes (returns) sequences Error: Failed to find host 'srs.ebi.ac.uk' for database 'emblebi' Error: Unable to read sequence 'emblebi:xlrhodop' Died: seqret terminated: Bad value for '-sequence' and no prompt Any other db-name (from showed by showdb) work also. Please say what a problem is? In being thanksgiving for any help! _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
