Hi,

I would like to search for a specific repeat using fuzznuc. It is pretty easy 
using a regexp in preg (yes, I know preg should really only be used for protein 
sequences:-)) via

preg -pattern '(TG{5,20}){2,10}'

but is there a way to do something similar in fuzznuc, since I would like to 
introduce mismatches.

Thanks for any help,

Steve
------------------------------------------------------------------
Medical Sciences Division
Weatherall Institute of Molecular Medicine/Sir William Dunn School
Oxford University


_______________________________________________
EMBOSS mailing list
[email protected]
http://lists.open-bio.org/mailman/listinfo/emboss

Reply via email to