You will have to add the mw of water (18) to get the total mw of your peptide.
- Koen. On Aug 14, 2007, at 4:46 PM, Mehrotra, Sudeep wrote: > Hello, > > I am trying to figure out how molecular weight of the peptide > fragments in > EMBOSS > "DIGEST" is calculated? > > For example: given fragment AEK, "DIGEST" returns a MW = 346.378. > > Now if i look at the residual masses(monoisotopic) of A E K they > are 71.03711, > 129.04259, 128.09496, respectively, these dont add up to 346.378. I > tried using > Average mass, as well as normal mw of AA in question, but i am not > to get a MW > of > 346.378. > It would be very helpful if you can explain how MW is calculated in > EMBOSS-DIGEST. > > Thanking You > Sudeep > > _______________________________________________ > EMBOSS mailing list > [email protected] > http://lists.open-bio.org/mailman/listinfo/emboss _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
