Dear Sir I'm sorry for a perhaps naive question. I want to align sequences of 1000 pairs. For example, "A" file includes 1000 sequences and "B" file includes 1000 sequences and two file will be compared. I'd like to find certain sequence( X gene) of A file which have high sequence similarity with some sequence ( X' gene) in B file. Then, certain gene (Y) in "A" file will be matched with Y' gene which have high identity in B file. Finally, I want to get matched 1000 pairs and their identity score. At one time, can I match mass sequences using Jemboss? How can I handle this problem?
Sincerely, Lee, Jee Young _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
