john walshaw (JIC) wrote: > Hello, > > If I create two swiss-format protein sequence files by using seqret on > an EMBOSS protein sequence DB, then use these two files as the input to > water or needle, I have to use "-sprotein1 -sprotein2" - otherwise they > are treated as DNA sequences.
Hmm ... so the ID line is being read as EMBL rather than SWISSPROT/UNIPROT. Can you send me the files and I will take a look. regards, Peter _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
