Hi Jon,


I don't think so.  You could have a look at:
http://emboss.sourceforge.net/apps/cvs/embassy/phylipnew/

Any maybe:
http://emboss.sourceforge.net/apps/cvs/emboss/apps/distmat.html


Aha from distmat Looks like

D = uncorrected distance = p-distance = 1-S

If you do write something new in C, please let's have the code
so it can be incorporated.


Steve
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Medical Sciences Division
Weatherall Institute of Molecular Medicine/Sir William Dunn School
Oxford University
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