Hi,
Another need that people have asked me several times (I am administrator of
a web forum on bioinformatics) is to have a standard and official web
interface to the emboss tools, since the list at
http://emboss.sourceforge.net/interfaces/#web is outdated and google doesn't
return clear results.
You can also give a try to Mobyle. Mobyle is the successor to the Pise system which is listed on the above page but not maintained anymore. Although it is not specific to EMBOSS, most of the package is interfaced, and it also supports other popular packages (ViennaRNA, Phylip...). You can try it at http://mobyle.pasteur.fr/cgi-bin/portal.py, and get further information at http://bioweb2.pasteur.fr/projects/mobyle/.
Regards,
Hervé Ménager
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