jason zhang wrote:
>ehmmbuild -auto -stdout -alignfile globins50.msf -nhmm globins50
-hmmfile globin.hmm -o out
Error: Unable to open file 'out/globin.hmm' for output
Died: ehmmbuild terminated: Bad value for '-hmmfile' with -auto defined
It seems that -o is treated as a directory. But the document/acd lists it
as outfile.
It will work with a different commandline order. With -o after -hmmfile
it is incorrectly assumed to be -odirectory (it should be an ambiguous
qualifier).
This is fixed in the July 15th release of EMBOSS.
regards,
Peter Rice
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