The fastx-toolkit may be what you are looking for: http://hannonlab.cshl.edu/fastx_toolkit/ ________________________________________ From: [email protected] [[email protected]] On Behalf Of michael watson (IAH-C) [[email protected]] Sent: 01 December 2009 14:33 To: [email protected] Subject: [EMBOSS] Trimming illumina short reads based on quality
Hi I'm sorry if I've not been keeping up to date on what is doubtless a hot topic. Does EMBOSS allow one to trim short reads based on quality data (from a fastq file)? If not, I have read that it is planned - any idea when it will be implemented? Otherwise, alternative suggestions are welcome! Thanks Mick _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
