Peter wrote:
Hi,
I have a protein IntelliGenetics file used in the Biopython test suite:
http://biopython.org/SRC/biopython/Tests/IntelliGenetics/VIF_mase-pro.txt
I am using EMBOSS 6.1.0 (patch level 2 I think), and I am trying
to turn this into a "GenBank Protein File", or GenPept file, using
EMBOSS seqret.
Doesn't EMBOSS seqret support genpept/refseqp as an output format?
Oddly enough you are the first to ask for it.
Does biopython have a definition of the fields it expects to write out
in a GenPept or RefseqP format file? We would be able to allow GenBank
as an alias for, presumably, genpept.
Might be a good time to merge the format names and details from
biopython and emboss. Where can Ifine the biopython ones?
regards,
Peter
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