Hi

I have a large number of .scf files that I need to batch convert to fasta format. I thought that abiview would be able to perform this function but I cannot get abiview to read the .scf files (although various sources on the internet suggest that it should be able to do so). It reads and displays .ab1 files with no problems. The webpage describing input formats (http://emboss.sourceforge.net/docs/themes/SequenceFormats.html ) doesn't mention scf. Is there an EMBOSS application that would convert .scf to .fa? Any help would be greatly appreciated. I am running Mac OSX 10.5.8 with EMBOSS 6.1.0-4 installed via fink.

Best wishes,

Phil Jones



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