Starting with a large mRNA fasta repository, what is the route to generating a derivative with the untranslated leader and post-stop codon segments trimmed off the mRNAs
This is enroute to a dicodon usage analysis, already written as a BASH script calling PERL modules. If anyone is interested in such applications, let me know. pdc (parse dicodons) works fine, taking about a second per pre-trimmed mRNA as it retreives from a FASTA repository. But before providing it to a Novice community, some fool proofing best be done. [email protected] _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
