> > You need to fix or comment out the tsw, emblnew, trembl and nbrf databases > to avoid those messages. whichdb tries all sequence databases and is a good > way to catch database that are not working (servers down, data or index > files not in the expected directory) >
after commenting those db i get the following: $: whichdb BCL2L10 Search all sequence databases for an entry and retrieve it Output file [outfile.whichdb]: stdout Warning: Cannot open division file '<null>' for database 'em' Warning: seqCdQry failed Warning: Cannot open division file '<null>' for database 'sw' Warning: seqCdQry failed Warning: Cannot open division file '<null>' for database 'trhuman' Warning: seqCdQry failed Warning: Cannot open division file '<null>' for database 'human' Warning: seqCdQry failed Warning: Cannot open division file '<null>' for database 'tremblnew' Warning: seqCdQry failed Warning: Cannot open division file '<null>' for database 'swissprot' Warning: seqCdQry failed Warning: Cannot open division file '<null>' for database 'embl' Warning: seqCdQry failed Warning: Cannot open division file '<null>' for database 'pir' EMBOSS An error in ajseqdb.c at line 5350: seqCdQryOpen failed _______________________________________________ EMBOSS mailing list EMBOSS@lists.open-bio.org http://lists.open-bio.org/mailman/listinfo/emboss
