Dear all, I just encountered the following bug:
If a file name contains a dash, then EMBOSS will be disturbed when a directory named as the string before that dash is present in the same directory. echo -e '>A\nAAAAAA' > test-1.fa cat test-1.fa # >A # AAAAAA seqret test-1.fa:A stdout # Read and write (return) sequences # >A # AAAAAA mkdir test seqret test-1.fa:A stdout # Read and write (return) sequences # Error: Query 'test-1.fa:A' query field '1.fa' not defined for datatype 'sequence' # Error: Unable to read sequence 'test-1.fa:A' # Died: seqret terminated: Bad value for '-sequence' and no prompt Cheers, -- Charles Plessy, Tsurumi, Kanagawa, Japan. _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
