Update:
In the meantime I discovered that the Ubuntu package still contained an 
older emscripten version, so I removed and manually installed the latest 
SDK (1.28). Also I removed all optimizations from my Makefile and made sure 
that really the fastcomp compiler is used, but nevertheless I get a 
compilation warning

emcc -O0 -Wall -DLUA_USE_POSIX  -o luac.js  luac.o print.o liblua.a
warning: unresolved symbol: _longjmp
warning: unresolved symbol: _setjmp

and a crash when try to test it in nodejs

nodejs luac.js dummy.luamissing function: _setjmp
-1
-1

/media/ram/lua_c/lua-5.1.5/src/luac.js:84
      throw ex;
            ^
abort() at Error
    at jsStackTrace (/media/ram/lua_c/lua-5.1.5/src/luac.js:987:13)
    at stackTrace (/media/ram/lua_c/lua-5.1.5/src/luac.js:1004:22)
    at abort (/media/ram/lua_c/lua-5.1.5/src/luac.js:49798:25)
    at __setjmp (/media/ram/lua_c/lua-5.1.5/src/luac.js:6215:52)
    at _luaD_rawrunprotected 
(/media/ram/lua_c/lua-5.1.5/src/luac.js:10970:9)
    at _lua_newstate (/media/ram/lua_c/lua-5.1.5/src/luac.js:22045:10)
    at _luaL_newstate (/media/ram/lua_c/lua-5.1.5/src/luac.js:30546:8)
    at _main (/media/ram/lua_c/lua-5.1.5/src/luac.js:6631:9)
    at Object.asm._main (/media/ram/lua_c/lua-5.1.5/src/luac.js:47916:19)
    at Object.callMain (/media/ram/lua_c/lua-5.1.5/src/luac.js:49674:30)

The program I try to compile is just a command line tool, it's the well 
known Lua (5.1), but not the interpreter, it's the compiler (luac) instead. 
I've also seen the Lua example and wonder why the interpreter is working 
smoothly while the compiler fails, as they both probably have a very 
similar if not even the same build progress. ?!?

Any idea is highly appreciated :-)

best regards

Steffen

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