Thanks for this contribution Graeme. I've raised https://jira.duraspace.org/browse/FCREPO-783 for the installation issue.
Regards Steve > -----Original Message----- > From: West, Graeme [mailto:graeme.w...@gcu.ac.uk] > Sent: 24 August 2010 17:37 > To: fedora-commons-users > Cc: Steve Bayliss > Subject: Re: [fcrepo-user] 3.4 install error: MySQL connector > copy (Debian 6, Tomcat 6) > > > Hello all, > I've adapted Christian Rohrer's Debian Etch howto to produce > a more up-to-date install guide for Fedora 3.4 on Debian 6, > taking into account the issues reported in this thread: > > https://wiki.duraspace.org/x/mghQAQ > > Hope it's useful to someone. > > Regards, > > Graeme > > > On 24 Aug 2010, at 15:49, West, Graeme wrote: > > > Hi Steve, > > Yes - the symlink is still necessary initially to prevent > the installer from flaking out, since copying the connector > to the default location fails otherwise. > > > > Adding "/var/lib/tomcat6/common/lib/*.jar" or > "/var/lib/tomcat6/common/lib/*.jar" to common.loader > certainly then causes Tomcat to pick up the JAR. > > > > But checking that the directory is part of the > common.loader dirs during install would make a lot of sense, > and would render the symlink unnecessary. Given the potential > for wildcards in common.loader, I suppose determining the > install location automatically from its values would be > tricky, but yes - even more useful! > > > > FYI: it has the following value by default in Debian 6: > > > >> > common.loader=${catalina.base}/lib,${catalina.base}/lib/*.jar, > ${catalina.home}/lib,${catalina.home}/lib/*.jar,/var/lib/tomca > t6/common/classes,/var/lib/tomcat6/common/*.jar > > > > > > Tomcat seems the not to drill down as far as the > $CATALINA_HOME/common/lib directory, but rather stop one > level higher, since placing the connector in > $CATALINA_HOME/common works fine. > > > > I'll include this stuff in my how-to when I post it. > > > > Thanks, > > > > Graeme > > > > > > On 24 Aug 2010, at 15:08, Steve Bayliss wrote: > > > >> Thanks Graeme > >> > >> I can see in catalina.properties in my installation that there is: > >> > >> common.loader=${catalina.home}/lib,${catalina.home}/lib/*.jar > >> > >> And on an earlier version of Tomcat I have: > >> > >> > common.loader=${catalina.home}/common/classes,${catalina.home} > /common/i18n/* > >> > .jar,${catalina.home}/common/endorsed/*.jar,${catalina.home}/c > ommon/lib/*.ja > >> r > >> > >> So we could at least be performing a check to see if the > intended location > >> is included there. Or maybe even determining the location > from that. > >> > >> Actually maybe that is a better option for you than > symlink-ing? You could > >> try adding the directory and adding it to that path/jar > path and see if it > >> is picked up? > >> > >> Steve > >> > >>> -----Original Message----- > >>> From: West, Graeme [mailto:graeme.w...@gcu.ac.uk] > >>> Sent: 24 August 2010 14:02 > >>> To: Steve Bayliss > >>> Cc: fedora-commons-users > >>> Subject: Re: [fcrepo-user] 3.4 install error: MySQL connector > >>> copy (Debian 6, Tomcat 6) > >>> > >>> > >>> Hi Steve, > >>> It's Tomcat 6.0.28-1 from Debian Squeeze [1]. > >>> > >>> The Fedora installer seems to require the lib --> classes > >>> symlink inside the 'common' folder, but putting Connector/J > >>> in there has no effect. I found that instead I had to create > >>> a $CATALINA_HOME/lib directory and put Connector/J into there. > >>> > >>> At the moment I'm in the middle of replicating my (working) > >>> test install on a production machine, after which I plan to > >>> add a rudimentary 'how to' guide for Fedora 3.4 on Debian 6 > >>> to the DuraSpace wiki. I'll circulate a link when it's done. > >>> > >>> I reckon that the mainline version of Tomcat 6.0.28/29 will > >>> probably be OK, since it has a lib directory in its > >>> $CATALINA_HOME. The Debian directory structure certainly > >>> seems non-standard compared to what's listed in the Tomcat > >>> documentation [2] (it assumes $CATALINA_HOME/lib ), but I > >>> haven't been able to find anything in the Debian package > >>> which explains why it varies, or indeed why it doesn't > >>> include such a directory. > >>> > >>> Perhaps others can confirm this? > >>> > >>> Thanks, > >>> > >>> Graeme > >>> > >>> [1] http://packages.debian.org/source/squeeze/tomcat6 > >>> [2] > >>> http://tomcat.apache.org/tomcat-6.0-doc/jndi-datasource-exampl > >>> es-howto.html#MySQL_DBCP_Example > >>> > >>> > >>> Graeme West > >>> Digital Repository Developer > >>> Information Services > >>> Glasgow Caledonian University > >>> graeme.w...@gcu.ac.uk > >>> > >>> > >>> > >>> On 24 Aug 2010, at 13:39, Steve Bayliss wrote: > >>> > >>>> Hi Graeme > >>>> > >>>> Could you confirm exactly which version of Tomcat it is - > >>> I'd like to make > >>>> sure there are no issues with the non-Debian version as well. > >>>> > >>>> We could perhaps provide a custom installer option for > >>> this. Or maybe > >>>> somehow detect this automatically and deal with it, though > >>> with the variety > >>>> of potential versions, distributions etc I'm not sure > >>> whether we would want > >>>> to do this. > >>>> > >>>> Regards > >>>> Steve > >>>> > >>>>> -----Original Message----- > >>>>> From: West, Graeme [mailto:graeme.w...@gcu.ac.uk] > >>>>> Sent: 23 August 2010 14:48 > >>>>> To: fedora-commons-users > >>>>> Subject: Re: [fcrepo-user] 3.4 install error: MySQL connector > >>>>> copy (Debian 6, Tomcat 6) > >>>>> > >>>>> > >>>>> Hi Jeremy, thanks for your help. > >>>>> > >>>>> FYI, I made a typo- I meant to write: > >>>>>> symlink /var/lib/tomcat6/common/classes to > >>>>> /var/lib/tomcat6/common/lib. > >>>>> > >>>>> > >>>>> Graeme > >>>>> > >>>>> > >>>>> On 23 Aug 2010, at 14:37, West, Graeme wrote: > >>>>> > >>>>>> Hello all. > >>>>>> As an adjunct to this, here is the (blindingly obvious) > >>>>> solution: symlink /var/lib/tomcat6/common/lib to > >>>>> /var/lib/tomcat6/common/lib. > >>>>>> > >>>>>> After that, the install proceeds fine. > >>>>>> > >>>>>> Hope this helps someone else running Debian. > >>>>>> > >>>>>> Graeme > >>>>>> > >>>>>> > >>>>>> > >>>>>> On 23 Aug 2010, at 13:10, West, Graeme wrote: > >>>>>> > >>>>>>> Hello all, > >>>>>>> First off, congrats to all those who contributed to the > >>>>> 3.4 release. It looks really nice so far. > >>>>>>> > >>>>>>> I say 'looks' because although it runs perfectly with the > >>>>> included Tomcat, I'm having trouble getting it running with > >>>>> an existing Tomcat 6 installation on Debian 6. I may be > >>>>> overlooking something silly, but I thought I'd post anyway. > >>>>>>> > >>>>>>> The problem is that seemingly no matter what I specify in > >>>>> the 'MySQL JDBC driver' part of the installer, whether it's > >>>>> 'included' or a custom value, it tries and fails to write the > >>>>> file into the Tomcat classes directory. Some examples are below. > >>>>>>> > >>>>>>> I think it seems to be happening because Fedora expects > >>>>> that Tomcat stores these class files in: > >>>>>>>> <tomcat_home>/common/lib/ > >>>>>>> > >>>>>>> whereas Debian's version (as far as I know) stores these in: > >>>>>>>> <tomcat_home>/common/classes/ > >>>>>>> > >>>>>>> > >>>>>>> I wonder whether there's a way to change the default > >>>>> location that the Fedora installer tries to copy the included > >>>>> or specified JAR file to, so that it won't fail? > >>>>>>> > >>>>>>> Examples: > >>>>>>> > >>>>>>> Using 'included': > >>>>>>>> Preparing FEDORA_HOME... > >>>>>>>> Configuring fedora.fcfg > >>>>>>>> Installing beSecurity > >>>>>>>> Will not overwrite existing /var/lib/tomcat6/conf/server.xml. > >>>>>>>> Wrote example server.xml to: > >>>>>>>> /usr/local/fedora/install/server.xml > >>>>>>>> WARNING: A keystore file already exists at: > >>>>> /var/lib/tomcat6/conf/keystore. > >>>>>>>> WARNING: The existing keystore will not be overwritten. > >>>>>>>> WARNING: The installer-provided keystore will not be > >>>>> installed, it will be copied to: > >>>>>>>> /usr/local/fedora/install/keystore > >>>>>>>> ERROR: Installation failed: > >>>>> /var/lib/tomcat6/common/lib/mysql-connector-java-5.1.6.jar > >>>>> (No such file or directory) > >>>>>>>> Caused by: > >>>>>>>> java.io.FileNotFoundException: > >>>>> /var/lib/tomcat6/common/lib/mysql-connector-java-5.1.6.jar > >>>>> (No such file or directory) > >>>>>>>> at java.io.FileOutputStream.open(Native Method) > >>>>>>>> at > java.io.FileOutputStream.<init>(FileOutputStream.java:209) > >>>>>>>> at > java.io.FileOutputStream.<init>(FileOutputStream.java:160) > >>>>>>>> at > >>>>> org.fcrepo.utilities.install.Installer.installJDBCDriver(Insta > >>>>> ller.java:197) > >>>>>>>> at > >>>>> org.fcrepo.utilities.install.container.ExistingTomcat50.instal > >>>>> l(ExistingTomcat50.java:22) > >>>>>>>> at > >>>>> > org.fcrepo.utilities.install.Installer.install(Installer.java:65) > >>>>>>>> at > >>>>> org.fcrepo.utilities.install.Installer.main(Installer.java:258) > >>>>>>>> at > >>> sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) > >>>>>>>> at > >>>>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccess > >>>>> orImpl.java:57) > >>>>>>>> at > >>>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMeth > >>>>> odAccessorImpl.java:43) > >>>>>>>> at java.lang.reflect.Method.invoke(Method.java:616) > >>>>>>>> at com.simontuffs.onejar.Boot.run(Boot.java:306) > >>>>>>>> at com.simontuffs.onejar.Boot.main(Boot.java:159) > >>>>>>> > >>>>>>> > >>>>>>> > >>>>>>> Using > >>>>> '/var/lib/tomcat6/common/lib/mysql-connector-java-5.1.13-bin.j > >>>>> ar' as the value, which I manually downloaded and installed > >>>>> into Tomcat: > >>>>>>> > >>>>>>>> Preparing FEDORA_HOME... > >>>>>>>> Configuring fedora.fcfg > >>>>>>>> Installing beSecurity > >>>>>>>> Will not overwrite existing /var/lib/tomcat6/conf/server.xml. > >>>>>>>> Wrote example server.xml to: > >>>>>>>> /usr/local/fedora/install/server.xml > >>>>>>>> WARNING: A keystore file already exists at: > >>>>> /var/lib/tomcat6/conf/keystore. > >>>>>>>> WARNING: The existing keystore will not be overwritten. > >>>>>>>> WARNING: The installer-provided keystore will not be > >>>>> installed, it will be copied to: > >>>>>>>> /usr/local/fedora/install/keystore > >>>>>>>> ERROR: Installation failed: Copy to > >>>>> /var/lib/tomcat6/common/lib/mysql-connector-java-5.1.13-bin.ja > >>>>> r failed. > >>>>>>> > >>>>>>> Using '/usr/share/java/mysql-connector-java.jar' as the > >>>>> value (this is a symlink to > >>>>> /var/lib/tomcat6/common/lib/mysql-connector-java-5.1.10.jar, > >>>>> and using the real location has the same result ). This is > >>>>> the version which ships with Debian. > >>>>>>> > >>>>>>>> Preparing FEDORA_HOME... > >>>>>>>> Configuring fedora.fcfg > >>>>>>>> Installing beSecurity > >>>>>>>> Will not overwrite existing /var/lib/tomcat6/conf/server.xml. > >>>>>>>> Wrote example server.xml to: > >>>>>>>> /usr/local/fedora/install/server.xml > >>>>>>>> WARNING: A keystore file already exists at: > >>>>> /var/lib/tomcat6/conf/keystore. > >>>>>>>> WARNING: The existing keystore will not be overwritten. > >>>>>>>> WARNING: The installer-provided keystore will not be > >>>>> installed, it will be copied to: > >>>>>>>> /usr/local/fedora/install/keystore > >>>>>>>> ERROR: Installation failed: Copy to > >>>>> /var/lib/tomcat6/common/lib/mysql-connector-java.jar failed. > >>>>>>>> r...@riga:/home/swadmin# java -jar fcrepo-installer-3.4.jar > >>>>>>> > >>>>>>> > >>>>>>> > >>>>>>> I'm using Tomcat 6.0.28-1 (Debian), MySQL 5.1.49-1 > >>>>> (Debian), libmysql-java 5.1.10+dfsg-2 and the Sun Java 6 JDK, > >>>>> all on a 64-bit Debian 6 VM. > >>>>>>> > >>>>>>> Many thanks in advance. > >>>>>>> > >>>>>>> Graeme West > >>>>>>> > >>>>>>> > >>>>>>> Digital Repository Developer > >>>>>>> Information Services > >>>>>>> Glasgow Caledonian University > >>>>>>> graeme.w...@gcu.ac.uk > >>>>>>> > >>>>>>> > >>>>>>> > >>>>>>> > >>>>>>> Glasgow Caledonian University is a registered Scottish > >>>>> charity, number SC021474 > >>>>>>> > >>>>>>> Winner: Times Higher Education's Widening Participation > >>>>> Initiative of the Year 2009 and Herald Society's Education > >>>>> Initiative of the Year 2009 > >>>>>>> > >>>>> http://www.gcu.ac.uk/newsevents/news/bycategory/theuniversity/ > >>>>> 1/name,6219,en.html > >>>>>>> > >>>>>>> > >>>>> -------------------------------------------------------------- > >>>>> ---------------- > >>>>>>> This SF.net email is sponsored by > >>>>>>> > >>>>>>> Make an app they can't live without > >>>>>>> Enter the BlackBerry Developer Challenge > >>>>>>> http://p.sf.net/sfu/RIM-dev2dev > >>>>>>> _______________________________________________ > >>>>>>> Fedora-commons-users mailing list > >>>>>>> Fedora-commons-users@lists.sourceforge.net > >>>>>>> > https://lists.sourceforge.net/lists/listinfo/fedora-commons-users > >>>>>>> > >>>>>>> Email has been scanned for viruses by Altman Technologies' > >>>>> email management service - www.altman.co.uk/emailsystems > >>>>>> > >>>>>> > >>>>>> Glasgow Caledonian University is a registered Scottish > >>>>> charity, number SC021474 > >>>>>> > >>>>>> Winner: Times Higher Education's Widening Participation > >>>>> Initiative of the Year 2009 and Herald Society's Education > >>>>> Initiative of the Year 2009 > >>>>>> > >>>>> http://www.gcu.ac.uk/newsevents/news/bycategory/theuniversity/ > >>>> 1/name,6219,en.html > >>>>> > >>>>> > >>>> > >>> -------------------------------------------------------------- > >>> -------------- > >>>> -- > >>>>> This SF.net email is sponsored by > >>>>> > >>>>> Make an app they can't live without > >>>>> Enter the BlackBerry Developer Challenge > >>>>> http://p.sf.net/sfu/RIM-dev2dev > >>>>> _______________________________________________ > >>>>> Fedora-commons-users mailing list > >>>>> Fedora-commons-users@lists.sourceforge.net > >>>>> > https://lists.sourceforge.net/lists/listinfo/fedora-commons-users > >>>>> > >>>>> Email has been scanned for viruses by Altman Technologies' email > >>>> management service - 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