A quick update, I was able to resolve the problem by configuring an external instance of Mulgara. However, note that the external mulgara instance had to run as root otherwise the same RI error is thrown.
Puppet config for fedora and external mulgara is in https://github.com/nigel-v-thomas/puppet-fcrepo and https://github.com/nigel-v-thomas/puppet-mulgara, respectively. Nigel On 08/01/2013 16:35, Roland van Laar wrote: > On 01/08/2013 05:25 PM, Nigel Thomas wrote: >> Hello Benjamin / Roland, >> >> I am having similar issues installing Fedora 3.6.2 on vagrant (Ubuntu >> 12.04 server), with RI index enabled, xacml disabled and >> fesl.authz.enabled=true. >> I have created a simple puppet module for Fedora 3.6.2 installation at >> https://github.com/nigel-v-thomas/puppet-fcrepo, which should help >> reproduce the problem. >> >> I have tried installing as root into /usr/share/fedora and >> /var/tmp/fedora, with full permission granted to relevant folders. Note >> that neither folders are mounts. > I solved it by using an NFS mount instead of the vboxfs one. > Since you are not using a mount, I'm not sure what the problem might be. > > regards, > > Roland > >> If I disable RI index, the install runs fine and data directory is >> populated with relevant demo objects, activemq-data, datastreamStore. >> This implies permissions can be ruled out. >> >> I have found a previous reference to the problem at >> https://jira.duraspace.org/browse/FCREPO-998, however this issue was >> resolved in Mulgara 2.1.12, which is packaged with 3.6.2. >> >> Benjamin suggested there may be other reasons? >> >> Any ideas? >> >> Nigel Thomas >> >> >> Roland van Laar <roland@...> writes: >> >>> Hello, >>> >>> >>> On Nov 16, 2012, at 4:43 PM, Benjamin Armintor wrote: >>> As you can see at the bottom of the stacktrace, the RI doesn't think >> it can write to its index. There are a couple of different ways this >> can happen, but the most common is that the user Tomcat is running under >> doesn't have write permissions to the RI data directory. >>> >>> >>> >>> Your assumption is correct. Thank you. >>> For future reference: I was running fedora in vagrant with /vagrant >> shared with vboxsf on OSX when I switched vboxsf to nfs the problems >> were solved. >>> Regards, >>> >>> Roland van Laar >>> >>> >>> On Fri, Nov 16, 2012 at 10:17 AM, Roland van Laar >> <roland-llqcdux9pksstnjn9+b...@public.gmane.org> wrote: >>> Hello, >>> I'm having troubles with installing fedora. >>> The following error has to do with RI. >>> I installed 3.6.1 with the included tomcat and derby. >>> Is this a known bug? Or can I do something to fix this. >>> Regards, >>> Roland van Laar >>> Java: >>> java version "1.6.0_37" >>> Java(TM) SE Runtime Environment (build 1.6.0_37-b06) >>> Java HotSpot(TM) 64-Bit Server VM (build 20.12-b01, mixed mode) >>> The error message: >>> ==> ../../tomcat/logs/localhost.2012-11-16.log <== >>> Nov 16, 2012 3:13:39 PM org.apache.catalina.core.StandardContext >> listenerStart >>> SEVERE: Exception sending context initialized event to listener >> instance of class org.springframework.web.context.ContextLoaderListener >>> org.springframework.beans.factory.BeanCreationException: Error >> creating bean with name 'org.fcrepo.server.Server' defined in >> ServletContext resource [/WEB-INF/applicationContext.xml]: Invocation of >> init method failed; nested exception is java.lang.RuntimeException: >> Fatal error while starting server >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1422) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:518) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455) >> >>> at >> org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293) >> >>> at >> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) >> >>> at >> org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290) >> >>> at >> org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192) >> >>> at >> org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:585) >> >>> at >> org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895) >> >>> at >> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425) >> >>> at >> org.springframework.web.context.ContextLoader.createWebApplicationContext(ContextLoader.java:282) >> >>> at >> org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:204) >> >>> at >> org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:47) >> >>> at >> org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4206) >> >>> at >> org.apache.catalina.core.StandardContext.start(StandardContext.java:4705) >> >>> at >> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799) >> >>> at >> org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779) >>> at >> org.apache.catalina.core.StandardHost.addChild(StandardHost.java:601) >>> at >> org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:675) >> >>> at >> org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:601) >> >>> at >> org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:502) >>> at >> org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317) >>> at >> org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324) >> >>> at >> org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142) >> >>> at >> org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065) >>> at >> org.apache.catalina.core.StandardHost.start(StandardHost.java:840) >>> at >> org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057) >>> at >> org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463) >>> at >> org.apache.catalina.core.StandardService.start(StandardService.java:525) >>> at >> org.apache.catalina.core.StandardServer.start(StandardServer.java:754) >>> at >>> org.apache.catalina.startup.Catalina.start(Catalina.java:595) >>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) >>> at >> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) >> >>> at >> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) >> >>> at java.lang.reflect.Method.invoke(Method.java:597) >>> at >>> org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) >>> at >>> org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) >>> Caused by: java.lang.RuntimeException: Fatal error while starting >>> server >>> at org.fcrepo.server.Server.init(Server.java:695) >>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) >>> at >> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) >> >>> at >> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) >> >>> at java.lang.reflect.Method.invoke(Method.java:597) >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1546) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1487) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1419) >> >>> ... 36 more >>> Caused by: org.springframework.beans.factory.BeanCreationException: >> Error creating bean with name >> 'org.fcrepo.server.resourceIndex.ResourceIndex': Invocation of init >> method failed; nested exception is >> org.fcrepo.server.errors.ModuleInitializationException: Error >> initializing RI >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1422) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:518) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455) >> >>> at >> org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293) >> >>> at >> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) >> >>> at >> org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290) >> >>> at >> org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192) >> >>> at >> org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:585) >> >>> at >> org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895) >> >>> at >> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425) >> >>> at org.fcrepo.server.Server.init(Server.java:630) >>> ... 43 more >>> Caused by: org.fcrepo.server.errors.ModuleInitializationException: >> Error initializing RI >>> at >> org.fcrepo.server.resourceIndex.ResourceIndexModule.initModule(ResourceIndexModule.java:128) >> >>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) >>> at >> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) >> >>> at >> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) >> >>> at java.lang.reflect.Method.invoke(Method.java:597) >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1546) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1487) >> >>> at >> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1419) >> >>> ... 53 more >>> Caused by: java.lang.UnsupportedOperationException: This >> MulgaraConnector is read-only! >>> at >> org.trippi.impl.mulgara.MulgaraConnector.getWriter(MulgaraConnector.java:107) >> >>> at >> org.fcrepo.server.resourceIndex.ResourceIndexImpl.<init>(ResourceIndexImpl.java:74) >> >>> at >> org.fcrepo.server.resourceIndex.ResourceIndexModule.initModule(ResourceIndexModule.java:121) >> >>> ... 60 more >>> >> ------------------------------------------------------------------------------ >> >>> Monitor your physical, virtual and cloud infrastructure from a single >>> web console. Get in-depth insight into apps, servers, databases, >>> vmware, >>> SAP, cloud infrastructure, etc. Download 30-day Free Trial. >>> Pricing starts from $795 for 25 servers or >> applications!http://p.sf.net/sfu/zoho_dev2dev_nov >>> _______________________________________________ >>> Fedora-commons-users mailing >> listFedora-commons-users-5NWGOfrQmneRv+LV9MX5uipxlwaOVQ5f@public.gmane.orghttps://lists.sourceforge.net/lists/listinfo/fedora-commons-users >> >>> >>> >>> >>> >> ------------------------------------------------------------------------------Monitor >> >> your physical, virtual and cloud infrastructure from a singleweb >> console. Get in-depth insight into apps, servers, databases, vmware,SAP, >> cloud infrastructure, etc. Download 30-day Free Trial.Pricing starts >> from $795 for 25 servers or >> applications!http://p.sf.net/sfu/zoho_dev2dev_nov_______________________________________________Fedora-commons-users >> >> mailing >> listFedora-commons-users-5NWGOfrQmneRv+LV9MX5uipxlwaOVQ5f@public.gmane.orghttps://lists.sourceforge.net/lists/listinfo/fedora-commons-users >> >>> >>> >>> >>> >>> >>> >> ------------------------------------------------------------------------------ >> >>> Monitor your physical, virtual and cloud infrastructure from a single >>> web console. Get in-depth insight into apps, servers, databases, >>> vmware, >>> SAP, cloud infrastructure, etc. Download 30-day Free Trial. >>> Pricing starts from $795 for 25 servers or applications! >>> http://p.sf.net/sfu/zoho_dev2dev_nov >>> >>> _______________________________________________ >>> Fedora-commons-users mailing list >>> Fedora-commons-users@... >>> https://lists.sourceforge.net/lists/listinfo/fedora-commons-users >>> >> >> >> ------------------------------------------------------------------------------ >> >> Master SQL Server Development, Administration, T-SQL, SSAS, SSIS, SSRS >> and more. Get SQL Server skills now (including 2012) with LearnDevNow - >> 200+ hours of step-by-step video tutorials by Microsoft MVPs and >> experts. >> SALE $99.99 this month only - learn more at: >> http://p.sf.net/sfu/learnmore_122512 >> _______________________________________________ >> Fedora-commons-users mailing list >> Fedora-commons-users@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/fedora-commons-users > > > ------------------------------------------------------------------------------ Master Java SE, Java EE, Eclipse, Spring, Hibernate, JavaScript, jQuery and much more. Keep your Java skills current with LearnJavaNow - 200+ hours of step-by-step video tutorials by Java experts. SALE $49.99 this month only -- learn more at: http://p.sf.net/sfu/learnmore_122612 _______________________________________________ Fedora-commons-users mailing list Fedora-commons-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fedora-commons-users
