I have a similar error to a user who wrote in 2014-03-03 (see
https://www.mail-archive.com/[email protected]/msg00366.html
):
Traceback (most recent call last):
File "demo_poisson.py", line 41, in <module>
V = FunctionSpace(mesh, "Lagrange", 1)
File "~/FEniCS/lib/python2.7/dist-packages/dolfin/functions/functionspace.py",
line 403, in __init__
FunctionSpaceBase.__init__(self, mesh, element, constrained_domain)
File "~/FEniCS/lib/python2.7/dist-packages/dolfin/functions/functionspace.py",
line 84, in __init__
ufc_element, ufc_dofmap = jit(self._ufl_element)
File "~/FEniCS/lib/python2.7/dist-packages/dolfin/compilemodules/jit.py",
line
60, in mpi_jit
return local_jit(*args, **kwargs)
File "~/FEniCS/lib/python2.7/dist-packages/dolfin/compilemodules/jit.py",
line
122, in jit
return jit_compile(form, parameters=p, common_cell=common_cell)
TypeError: jit() got an unexpected keyword argument 'common_cell'
In the same thread, Anders Logg suggested updating DOLFIN, UFL, and
FFC. I installed everything through Dorsal; to my knowledge, each
package is at the most recent stable version. If you let me know which
files to send, I can send build logs.
I've also tried using Dorsal to build the development versions of
these packages. On OS X with Homebrew and LLVM 3.3, there seems to be
an issue with the development version of FFC; clang++ throws a number
of errors related to std::shared_ptr (in SWIG-generated interfaces)
that have to do with the version of libstdc++ clang++ is using. If I
compile and link with libc++ instead, those problems go away, but
linking errors occur (with Boost; rebuilding Boost with libc++ does
not seem to work either).
Are there other ways to resolve this problem while still building with Homebrew?
Cheers,
Geoff
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