On Sun, Apr 13, 2014 at 3:09 AM, Mike Sussman <[email protected]> wrote:
>
> I just upgraded from Kubuntu 13.04 to 13.10, primarily because 13.04 is too
> old to be supported and I am worried about security other support.
>
> Now fenics doesn't work anymore, and I need help recovering.
>
> After the upgrade, I followed the instructions on the fenics download page:
>
> sudo add-apt-repository ppa:fenics-packages/fenics
> sudo apt-get update
> sudo apt-get install fenics
> sudo apt-get dist-upgrade
>
> Then I tried one of the fenics demos and I see the following errors:
>  % python d1_p2D.py
> ***
> -------------------------------------------------------------------------
>
> *** Warning: UnitSquare has been deprecated in DOLFIN version 1.1.0.
> *** The class UnitSquare has been replaced by UnitSquareMesh.
> ***
> -------------------------------------------------------------------------
>
>
> Traceback (most recent call last):
>   File "d1_p2D.py", line 16, in <module>
>     V = FunctionSpace(mesh, 'Lagrange', 1)
>   File "/usr/lib/python2.7/dist-packages/dolfin/functions/functionspace.py",
> line 403, in __init__
>
>     FunctionSpaceBase.__init__(self, mesh, element, constrained_domain)
>   File "/usr/lib/python2.7/dist-packages/dolfin/functions/functionspace.py",
> line 84, in __init__
>     ufc_element, ufc_dofmap = jit(self._ufl_element)
>
>   File "/usr/lib/python2.7/dist-packages/dolfin/compilemodules/jit.py", line
> 60, in mpi_jit
>     return local_jit(*args, **kwargs)
>   File "/usr/lib/python2.7/dist-packages/dolfin/compilemodules/jit.py", line
> 122, in jit
>
>     return jit_compile(form, parameters=p, common_cell=common_cell)
>   File "/usr/lib/python2.7/dist-packages/ffc/jitcompiler.py", line 76, in
> jit
>     return jit_element(ufl_object, parameters)
>   File "/usr/lib/python2.7/dist-packages/ffc/jitcompiler.py", line 252, in
> jit_element
>
>     compiled_form, module, form_data, prefix = jit_form(form, parameters)
>   File "/usr/lib/python2.7/dist-packages/ffc/jitcompiler.py", line 175, in
> jit_form
>     module_name = "ffc_form_" + jit_object.signature()
>
>   File "/usr/lib/python2.7/dist-packages/ffc/jitobject.py", line 91, in
> signature
>     swig_signature = str(get_swig_version())
>   File "/usr/lib/python2.7/dist-packages/instant/config.py", line 47, in
> get_swig_version
>
>     result, output = get_status_output("%s -version"%get_swig_binary())
>   File "/usr/lib/python2.7/dist-packages/instant/output.py", line 82, in
> get_status_output
>     pipe = Popen(cmd, shell=False, cwd=cwd, env=env, stdout=PIPE,
> stderr=STDOUT)
>
>   File "/usr/lib/python2.7/subprocess.py", line 709, in __init__
>     errread, errwrite)
>   File "/usr/lib/python2.7/subprocess.py", line 1326, in _execute_child
>     raise child_exception
> OSError: [Errno 2] No such file or directory
>
>
> Forgive me, but I cannot see what file is missing.  Please help me recover.

I think the problem here is the file dolfin_parameters.xml in the
tutorial examples. This file defines some swig parameters that won't
work on all setups. Removing these swig related parameters in
dolfin_parameters.xml should fix this issue.

Johannes
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