I am trying to install dolfin through dorsal using rhl6, but the
install gets stuck :
Found configuration for project FEniCS.
Fetching dolfin-1.3.0
Verifying dolfin-1.3.0
dolfin-1.3.0.tar.gz: OK
Unpacking dolfin-1.3.0
Building dolfin-1.3.0
patching file demo/undocumented/plot-qt/cpp/CMakeLists.txt
patching file dolfin/CMakeLists.txt
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
fatal: Not a git repository (or any parent up to mount point
/uio/hume/student-u29)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not
set).
-- Performing Test HAVE_PIPE
-- Performing Test HAVE_PIPE - Success
-- Performing Test HAVE_PEDANTIC
-- Performing Test HAVE_PEDANTIC - Success
-- Performing Test HAVE_STD
-- Performing Test HAVE_STD - Success
-- Performing Test HAVE_DEBUG
-- Performing Test HAVE_DEBUG - Success
-- Performing Test HAVE_O2_OPTIMISATION
-- Performing Test HAVE_O2_OPTIMISATION - Success
-- The Fortran compiler identification is GNU
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Found MPI_C: /uio/hume/student-u29/imranal/Work/FEniCS/lib/libmpi.so
-- Found MPI_CXX:
/uio/hume/student-u29/imranal/Work/FEniCS/lib/libmpi_cxx.so;/uio/hume/student-u29/imranal/Work/FEniCS/lib/libmpi.so
-- Found MPI_Fortran:
/uio/hume/student-u29/imranal/Work/FEniCS/lib/libmpi_usempi.so;/uio/hume/student-u29/imranal/Work/FEniCS/lib/libmpi_mpifh.so;/uio/hume/student-u29/imranal/Work/FEniCS/lib/libmpi.so
-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Found OpenMP: -fopenmp
-- Performing Test OPENMP_UINT_TEST_RUNS
-- Performing Test OPENMP_UINT_TEST_RUNS - Success
-- Boost version: 1.51.0
-- Found the following Boost libraries:
-- filesystem
-- program_options
-- system
-- thread
-- iostreams
-- mpi
-- serialization
-- timer
-- chrono
-- UFC version: 2.3.0
-- Found Eigen3:
/uio/hume/student-u29/imranal/Work/FEniCS/include/eigen3 (Required is at
least version "3.0.0")
-- Found LibXml2: /usr/lib64/libxml2.so
-- Found PythonInterp:
/uio/hume/student-u29/imranal/Work/FEniCS/bin/python (Required is at
least version "2")
CMake Warning (dev) at CMakeLists.txt:306 (find_package):
Ignoring EXACT since no version is requested.
This warning is for project developers. Use -Wno-dev to suppress it.
-- NumPy header version 1.6.2 found
-- Found SWIG: /uio/hume/student-u29/imranal/Work/FEniCS/bin/swig
(found version "2.0.3")
-- Checking for package 'PETSc'
-- PETSC_DIR is /uio/hume/student-u29/imranal/Work/FEniCS
-- PETSC_ARCH is empty
-- Found petscconf.h
At this point nothing happens.
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