There is mismatch in linking to UMFPACK. You have one downloaded and compiled by PETSc in /home/manuel/Downloads/fenics/src/petsc-3.4.2/linux-gnu-cxx-opt/lib/libumfpack.a and another one in /usr/lib/libumfpack.so.5.4.0.
I'm not sure what's the correct solution (you could ask at petsc-maint list http://www.mcs.anl.gov/petsc/miscellaneous/mailing-lists.html), but you could try removing 'umfpack' from dorsal/FEniCS/packages/petsc.package, removing /home/manuel/Downloads/fenics/src/petsc-3.4.2/linux-gnu-cxx-opt/lib/libumfpack.a and trying again. Jan On Fri, 8 Aug 2014 15:00:19 +0000 Manuel Baumann <[email protected]> wrote: > Hi all, > > I am still having a problem installing dolfin with dorsal on my > laptop. It stops when trying to install petsc-3.4.2. The error > massage is: > > > TESTING: check from > > config.libraries(/home/manuel/Downloads/fenics/src/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) > > ******************************************************************************* > > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for > > details): > > ------------------------------------------------------------------------------- > > --with-ml-lib=['/home/manuel/Downloads/fenics/lib/libml.so'] and > > --with-ml-include=['/home/manuel/Downloads/fenics/include/trilinos'] > > did not work > > ******************************************************************************* > > > > Failure with exit status: 1 > > Exit message: There was a problem building petsc-3.4.2. > > > I uploaded my configure.log file here: > > https://www.dropbox.com/s/h4o5b2zbuqfj5vh/configure.log > > > Please help me out! > Manuel > > ________________________________________ > Von: Jan Blechta [[email protected]] > Gesendet: Mittwoch, 6. August 2014 17:15 > An: Manuel Baumann > Cc: [email protected] > Betreff: Re: [FEniCS-support] problem building petsc-3.4.2 during > fenics installation > > On Wed, 6 Aug 2014 14:46:18 +0000 > Manuel Baumann <[email protected]> wrote: > > > Hi all, > > > > I am trying to install dolfin using dorsal and I run into a problem > > when petsc should be installed: > > > > TESTING: check from > > config.libraries(/home/manuel/Downloads/fenics/src/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) > > ******************************************************************************* > > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for > > details): > > ------------------------------------------------------------------------------- > > --with-ml-lib=['/home/manuel/Downloads/fenics/lib/libml.so'] and > > --with-ml-include=['/home/manuel/Downloads/fenics/include/trilinos'] > > did not work > > ******************************************************************************* > > > > Failure with exit status: 1 > > Exit message: There was a problem building petsc-3.4.2. > > > > > > I am not including the file 'configure.log' since it's rather big. > > You should provide it. Message above does not provide sufficient > details about the problem. > > Jan > > > Thanks for any help :) > > > > Manuel > > > > -- > > Manuel Baumann > > > > Delft University of Technology > > Faculty of Electrical Engineering, Mathematics and Computer Science > > Mekelweg 4, 2628 CD Delft, The Netherlands > > > > Email: [email protected] > > Web: http://ta.twi.tudelft.nl/nw/users/mmbaumann > > > > _______________________________________________ > > fenics-support mailing list > > [email protected] > > http://fenicsproject.org/mailman/listinfo/fenics-support > > _______________________________________________ > fenics-support mailing list > [email protected] > http://fenicsproject.org/mailman/listinfo/fenics-support _______________________________________________ fenics-support mailing list [email protected] http://fenicsproject.org/mailman/listinfo/fenics-support
