Hello,
I am trying to install FEniCS on my laptop (Ubuntu 1.04 LTS). First, I
tried to install it with the command: sudo apt-get install fenics, and then
add the Ubuntu PPA... Exactly as it is described on the Fenics website. I
didn't have any problems during installation. However, after it I could not
import dorfin while running python (Anaconda distribution Python 2.7.7)
having "ImportError: No module named dolfin". Then, I decided to repeat
installation using Dorsal, and the following problem occurred:
Probing the environment ...
-- CMAKE_BUILD_TYPE='Release'
-- MPI_USE_COMPILER_WRAPPERS='ON'
-- Leaving current CMAKE_C_COMPILER=mpicc since it is already set!
-- Leaving current CMAKE_CXX_COMPILER=mpicxx since it is already set!
-- Leaving current CMAKE_Fortran_COMPILER=mpif90 since it is already set!
-- MPI_EXEC='/usr/bin/mpiexec'
-- CMAKE_C_COMPILER_ID='GNU'
-- CMAKE_CXX_COMPILER_ID='GNU'
-- Trilinos_HOSTNAME='DeSa-SVE1511N1RB'
-- CMAKE_HOST_SYSTEM_NAME='Linux'
-- Looking for C++ include sys/time.h
-- Looking for C++ include sys/time.h - found
-- Looking for C++ include time.h
-- Looking for C++ include time.h - found
-- Looking for C++ include stdint.h
-- Looking for C++ include stdint.h - found
-- Looking for C++ include inttypes.h
-- Looking for C++ include inttypes.h - found
-- Found Perl: /usr/bin/perl (found version "5.14.2")
-- Fortran name mangling: LOWER UNDER
-- Verifying Fortran/CXX Compiler Compatibility
-- Verifying Fortran/CXX Compiler Compatibility - Failed
CMake Error at /usr/share/cmake-2.8/Modules/FortranCInterface.cmake:288
(message):
The Fortran compiler:
/home/denis/apps/python_anaconda/bin/mpif90
and the CXX compiler:
/home/denis/apps/python_anaconda/bin/mpicxx
failed to compile a simple test project using both languages. The output
was:
Change Dir:
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX
Run Build Command:/usr/bin/make
/usr/bin/cmake -H/usr/share/cmake-2.8/Modules/FortranCInterface/Verify
-B/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX
--check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX/CMakeFiles
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
/usr/bin/make -f CMakeFiles/VerifyFortran.dir/build.make
CMakeFiles/VerifyFortran.dir/depend
make[2]: Entering directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
cd
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX
&& /usr/bin/cmake -E cmake_depends "Unix Makefiles"
/usr/share/cmake-2.8/Modules/FortranCInterface/Verify
/usr/share/cmake-2.8/Modules/FortranCInterface/Verify
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX/CMakeFiles/VerifyFortran.dir/DependInfo.cmake
make[2]: Leaving directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
/usr/bin/make -f CMakeFiles/VerifyFortran.dir/build.make
CMakeFiles/VerifyFortran.dir/requires
make[2]: Entering directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
make[2]: Nothing to be done for `CMakeFiles/VerifyFortran.dir/requires'.
make[2]: Leaving directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
/usr/bin/make -f CMakeFiles/VerifyFortran.dir/build.make
CMakeFiles/VerifyFortran.dir/build
make[2]: Entering directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
Linking Fortran static library libVerifyFortran.a
/usr/bin/cmake -P CMakeFiles/VerifyFortran.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script
CMakeFiles/VerifyFortran.dir/link.txt --verbose=1
"" cr libVerifyFortran.a CMakeFiles/VerifyFortran.dir/VerifyFortran.f.o
Error running link command: No such file or directory
make[2]: *** [libVerifyFortran.a] Error 2
make[2]: Leaving directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
make[1]: *** [CMakeFiles/VerifyFortran.dir/all] Error 2
make[1]: Leaving directory
`/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/FortranCInterface/VerifyCXX'
make: *** [all] Error 2
Call Stack (most recent call first):
cmake/tribits/package_arch/TribitsFortranMangling.cmake:50
(FortranCInterface_VERIFY)
cmake/tribits/package_arch/TribitsGlobalMacros.cmake:1260 (INCLUDE)
cmake/tribits/package_arch/TribitsProjectImpl.cmake:226
(TRIBITS_SETUP_ENV)
cmake/tribits/package_arch/TribitsProject.cmake:75 (TRIBITS_PROJECT_IMPL)
CMakeLists.txt:88 (TRIBITS_PROJECT)
-- Configuring incomplete, errors occurred!
See also
"/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/CMakeOutput.log".
See also
"/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir/CMakeFiles/CMakeError.log".
You have changed variables that require your cache to be deleted.
Configure will be re-run and you may have to reset some variables.
The following variables have changed:
CMAKE_C_COMPILER= mpicc
CMAKE_CXX_COMPILER= mpicxx
CMAKE_Fortran_COMPILER= mpif90
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
Trilinos_INSTALL_INCLUDE_DIR
UMFPACK_INCLUDE_DIRS
-- Build files have been written to:
/home/denis/Work/FEniCS/src/trilinos-11.4.1-Source/dorsal_build_dir
Failure with exit status: 1
Exit message: There was a problem configuring trilinos-11.4.1-Source.
I would very appreciate if you could help me to fix it.
Thank you for your time!
Best regards,
Denis
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