On Thu, 30 Oct 2014 12:48:52 -0400 (EDT) Andy Youstic <[email protected]> wrote:
> Greetings, > > Ah, thanks. That worked for me. But now...I've got another stopping > point: > > /usr/local/src/fenics/dolfin-1.4.0/dolfin/la/PETScLUSolver.cpp: In > member function ‘void > dolfin::PETScLUSolver::set_petsc_operators()’: > /usr/local/src/fenics/dolfin-1.4.0/dolfin/la/PETScLUSolver.cpp:453: > error: ‘SAME_PRECONDITIONER’ was not declared in this > scope /usr/local/fenics/include/petscksp.h:260: error: too many > arguments to function ‘PetscErrorCode KSPSetOperators(_p_KSP*, > _p_Mat*, > _p_Mat*)’ /usr/local/src/fenics/dolfin-1.4.0/dolfin/la/PETScLUSolver.cpp:458: > error: at this point in > file /usr/local/fenics/include/petscksp.h:260: error: too many > arguments to function ‘PetscErrorCode KSPSetOperators(_p_KSP*, > _p_Mat*, > _p_Mat*)’ /usr/local/src/fenics/dolfin-1.4.0/dolfin/la/PETScLUSolver.cpp:464: > error: at this point in file make[2]: *** > [dolfin/CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o] Error 1 > make[2]: *** Waiting for unfinished jobs.... make[2]: Leaving > directory `/usr/local/src/fenics/dolfin-1.4.0/dorsal_build_dir' > make[1]: *** [dolfin/CMakeFiles/dolfin.dir/all] Error 2 make[1]: > Leaving directory > `/usr/local/src/fenics/dolfin-1.4.0/dorsal_build_dir' make: *** [all] > Error 2 make: Leaving directory > `/usr/local/src/fenics/dolfin-1.4.0/dorsal_build_dir' Seems like you're trying to compile DOLFIN 1.4.0 with PETSc 3.5. Supported combinations are - either DOLFIN 1.4.0 + PETSc 3.3,3.4 - or DOLFIN dev + PETSc 3.3,3.4,3.5,dev Jan > > Johannes, any thoughts? > > Regards, > > Andy > > > ----- Original Message ----- > From: "Johannes Ring" <[email protected]> > To: "Andy Youstic" <[email protected]> > Cc: [email protected] > Sent: Tuesday, October 28, 2014 2:52:36 AM > Subject: Re: [FEniCS-support] Can't seem to build fenics using > doral.sh -- CentOS6 > > On Mon, Oct 27, 2014 at 8:06 PM, Andy Youstic <[email protected]> wrote: > > We've recently had a request to install the fenics suite on one of > > our linux workstations and am encountering difficulty. We get down > > to VTK and get the following error (appears to be from cmake > > regarding python includes). I'm not sure what to troubleshoot here. > > Any help would be appreciated. Thanks in advance. > > > > Fetching vtk-5.8.0 > > Verifying vtk-5.8.0 > > vtk-5.8.0.tar.gz: OK > > Unpacking vtk-5.8.0 > > Building vtk-5.8.0 > > -- Could NOT find PythonLibs (missing: PYTHON_LIBRARIES > > PYTHON_INCLUDE_DIRS) -- Found Tclsh: /usr/bin/tclsh > > -- Found TCL: /usr/lib64/libtcl.so > > -- Found TCLTK: /usr/lib64/libtcl.so > > -- Found TK: /usr/lib64/libtk.so > > -- Filter ZLIB is ON > > CMake Error: The following variables are used in this project, but > > they are set to NOTFOUND. Please set them or make sure they are set > > and tested correctly in the CMake files: PYTHON_INCLUDE_DIR > > (ADVANCED) used as include directory in > > directory /usr/local/src/fenics/VTK/Wrapping used as include > > directory in directory /usr/local/src/fenics/VTK/Common used as > > include directory in directory /usr/local/src/fenics/VTK/Filtering > > used as include directory in > > directory /usr/local/src/fenics/VTK/Imaging used as include > > directory in directory /usr/local/src/fenics/VTK/Graphics used as > > include directory in > > directory /usr/local/src/fenics/VTK/GenericFiltering used as > > include directory in directory /usr/local/src/fenics/VTK/IO used as > > include directory in directory /usr/local/src/fenics/VTK/Rendering > > used as include directory in > > directory /usr/local/src/fenics/VTK/VolumeRendering used as include > > directory in directory /usr/local/src/fenics/VTK/Hybrid used as > > include directory in directory /usr/local/src/fenics/VTK/Widgets > > used as include directory in > > directory /usr/local/src/fenics/VTK/Infovis used as include > > directory in directory /usr/local/src/fenics/VTK/Geovis used as > > include directory in directory /usr/local/src/fenics/VTK/Views used > > as include directory in directory /usr/local/src/fenics/VTK/Charts > > used as include directory in > > directory /usr/local/src/fenics/VTK/Wrapping/Python PYTHON_LIBRARY > > (ADVANCED) linked by target "vtkWrapPython" in > > directory /usr/local/src/fenics/VTK/Wrapping linked by target > > "vtkpython" in directory /usr/local/src/fenics/VTK/Wrapping/Python > > > > -- Configuring incomplete, errors occurred! > > Failure with exit status: 1 > > Exit message: There was a problem configuring vtk-5.8.0. > > I looks like cmake is unable to locate the Python include directory > and Python libraries. Are you using the rhel6.platform file? In that > case it is assumed that you have installed the python-devel package. > Did you do that? > > Johannes > > > > _______________________________________________ > fenics-support mailing list > [email protected] > http://fenicsproject.org/mailman/listinfo/fenics-support _______________________________________________ fenics-support mailing list [email protected] http://fenicsproject.org/mailman/listinfo/fenics-support
