Hi,
when building a recent development version, I get the following when I test the
build:
$ python -c "from dolfin import *; FunctionSpace(UnitIntervalMesh(10), 'CG', 1)"
Traceback (most recent call last):
File "<string>", line 1, in <module>
File
"/mn/anatu/modules/opt/FEniCS/1.5.0_2015.04.12_dev/profile/dcoztv5kbquz/lib/python2.7/site-packages/dolfin/__init__.py",
line 16, in <module>
from . import cpp
File
"/mn/anatu/modules/opt/FEniCS/1.5.0_2015.04.12_dev/profile/dcoztv5kbquz/lib/python2.7/site-packages/dolfin/cpp/__init__.py",
line 42, in <module>
exec("from . import %s" % module_name)
File "<string>", line 1, in <module>
File
"/mn/anatu/modules/opt/FEniCS/1.5.0_2015.04.12_dev/profile/dcoztv5kbquz/lib/python2.7/site-packages/dolfin/cpp/common.py",
line 32, in <module>
_common = swig_import_helper()
File
"/mn/anatu/modules/opt/FEniCS/1.5.0_2015.04.12_dev/profile/dcoztv5kbquz/lib/python2.7/site-packages/dolfin/cpp/common.py",
line 28, in swig_import_helper
_mod = imp.load_module('_common', fp, pathname, description)
ImportError: libboost_chrono.so.1.55.0: cannot open shared object file: No such
file or directory
It works just fine if I add the profiles lib directory
(/mn/anatu/modules/opt/FEniCS/1.5.0_2015.04.12_dev/profile/dcoztv5kbquz/lib/ in
this case) to LD_LIBRARY_PATH, but that’s not a particularly pretty solution.
The config and build process worked fine before the transition to a newer SWIG
in mid-march. Is this reproducible elsewhere?
My config is as follows:
extends:
- file: linux.yaml
packages:
openblas:
launcher:
cmake:
pcre:
python:
link: shared
mpi:
use: mpich
blas:
use: lapack
lapack:
use: lapack
petsc:
build_with: |
parmetis, scotch, suitesparse
download: |
hypre, mumps, scalapack, blacs, ml
coptflags: -O2
link: shared
debug: false
swig:
boost:
toolset: gcc
address_model: 64
build_with: python
ipython:
matplotlib:
python-netcdf4:
pyvtk:
vtk:
ffc:
fiat:
instant:
ufl:
mshr:
uflacs:
h5py:
numpy:
scipy:
slepc4py:
# scitools:
suitesparse:
trilinos:
setuptools:
fenicstools:
dolfin:
build_with: |
hdf5, parmetis, petsc, petsc4py, suitesparse, scotch, slepc, vtk, zlib,
trilinos, slepc4py, qt, sphinx
mpi4py:
cbcblock:
cbcpost:
--
Terje Kvernes
Head sysadmin
Department of Mathematics
University of Oslo
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