John Mahoney wrote:
> I hope direct email reply is ok.
>
It's better to reply to the list, since that increases one's chances of
somebody else having seen your error and found a solution.
> My machine is MacBook Intel with OS 10.4.9
>
> Not sure what qualifies as an error. 'NOT AVAILABLE',
> etc. So here is the log.
>
> (2007.06.05-12.30.08) ...
> gzip -dc /sw/src/scipy-0.5.2.tar.gz | /sw/bin/tar -xf
> - --no-same-owner --no-same-permissions
> Use of uninitialized value in list assignment at
> /sw/lib/perl5/Fink/PkgVersion.pm line 4894.
> Use of uninitialized value in list assignment at
> /sw/lib/perl5/Fink/PkgVersion.pm line 4894.
> patch -p1
> </sw/fink/dists/unstable/main/finkinfo/sci/scipy-py.patch
> patching file Lib/sandbox/setup.py
> Use of uninitialized value in list assignment at
> /sw/lib/perl5/Fink/PkgVersion.pm line 4894.
> Use of uninitialized value in list assignment at
> /sw/lib/perl5/Fink/PkgVersion.pm line 4894.
> /sw/bin/python2.5 setup.py config_fc --fcompiler=g95
> build
> mkl_info:
> libraries mkl,vml,guide not found in /usr/lib
> libraries mkl,vml,guide not found in /sw/lib
> NOT AVAILABLE
>
> fftw3_info:
> libraries fftw3 not found in /usr/lib
> FOUND:
> libraries = ['fftw3']
> library_dirs = ['/sw/lib']
> define_macros = [('SCIPY_FFTW3_H', None)]
> include_dirs = ['/sw/include']
>
> djbfft_info:
> NOT AVAILABLE
>
> blas_opt_info:
> FOUND:
> extra_link_args = ['-Wl,-framework',
> '-Wl,Accelerate']
> define_macros = [('NO_ATLAS_INFO', 3)]
> extra_compile_args = ['-msse3',
> '-I/System/Library/Frameworks/vecLib.framework/Headers']
>
> lapack_opt_info:
> FOUND:
> extra_link_args = ['-Wl,-framework',
> '-Wl,Accelerate']
> define_macros = [('NO_ATLAS_INFO', 3)]
> extra_compile_args = ['-msse3']
>
> non-existing path in 'Lib/linsolve': 'tests'
> umfpack_info:
> libraries umfpack not found in /usr/lib
> libraries umfpack not found in /sw/lib
> /sw/lib/python2.5/site-packages/numpy/distutils/system_info.py:403:
> UserWarning:
> UMFPACK sparse solver
> (http://www.cise.ufl.edu/research/sparse/umfpack/)
> not found. Directories to search for the libraries
> can be specified in the
> numpy/distutils/site.cfg file (section [umfpack])
> or by setting
> the UMFPACK environment variable.
> warnings.warn(self.notfounderror.__doc__)
> NOT AVAILABLE
>
> non-existing path in 'Lib/maxentropy': 'doc'
> Traceback (most recent call last):
> File "setup.py", line 55, in <module>
> setup_package()
> File "setup.py", line 47, in setup_package
> configuration=configuration )
> File
> "/sw/lib/python2.5/site-packages/numpy/distutils/core.py",
> line 142, in setup
> config = configuration()
> File "setup.py", line 19, in configuration
> config.add_subpackage('Lib')
> File
> "/sw/lib/python2.5/site-packages/numpy/distutils/misc_util.py",
> line 772, in add_subpackage
> caller_level = 2)
> File
> "/sw/lib/python2.5/site-packages/numpy/distutils/misc_util.py",
> line 755, in get_subpackage
> caller_level = caller_level + 1)
> File
> "/sw/lib/python2.5/site-packages/numpy/distutils/misc_util.py",
> line 702, in _get_configuration_from_setup_py
> config = setup_module.configuration(*args)
> File
> "/sw/src/fink.build/scipy-py25-0.5.2-3/scipy-0.5.2/Lib/setup.py",
> line 15, in configuration
> config.add_subpackage('odr')
> File
> "/sw/lib/python2.5/site-packages/numpy/distutils/misc_util.py",
> line 772, in add_subpackage
> caller_level = 2)
> File
> "/sw/lib/python2.5/site-packages/numpy/distutils/misc_util.py",
> line 755, in get_subpackage
> caller_level = caller_level + 1)
> File
> "/sw/lib/python2.5/site-packages/numpy/distutils/misc_util.py",
> line 687, in _get_configuration_from_setup_py
> ('.py', 'U', 1))
> File "Lib/odr/setup.py", line 9, in <module>
> from numpy.distutils.misc_util import get_path,
> Configuration, dot_join
> ImportError: cannot import name get_path
>
>
>
(maintainer cc'ed)
I get essentially the same output, and failure mode, except that I get a
strange crossover between python2.3 and python2.5 modules. I've posted
a copy of my build log at:
http://127.0.0.1/~hansen/finklogs/fink-build-log_scipy-py25
to show the extra parts.
>
> --- "Alexander K. Hansen" <[EMAIL PROTECTED]> wrote:
>
>
>> john mahoney wrote:
>>
>>> I have successfully installed a few packages
>>>
>> through fink
>>
>>> (python 25, ipython 25, visual 25..).
>>> But am having trouble installing scipy.
>>>
>>> Is anyone else having similar problems with scipy?
>>>
>>> What relevant information from the install log can
>>>
>> I look at or post here?
>>
>>> (it wouldnt let me paste the whole
>>> thing)
>>>
>>> Any advice is appreciated. - john
>>>
>>> ----------
>>>
>>>
>>>
>>>
>> Your architecture would be a good piece of
>> information.
>>
>> As to the actual error message: how about we start
>> with the last
>> error-free command that was run, and everything
>> after that?
>>
>> --
>> Alexander K. Hansen
>> Fink User Liaison/Documenter
>> akh AT finkproject DOT org
>>
>>
>>
>
>
>
>
> ____________________________________________________________________________________
> Don't get soaked. Take a quick peak at the forecast
> with the Yahoo! Search weather shortcut.
> http://tools.search.yahoo.com/shortcuts/#loc_weather
>
--
Alexander K. Hansen
akh AT finkproject DOT org
Fink User Liaison and Documenter
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