Hallo all,
I am having trouble to update packages that I previously installed with fink.
This is what I did:
I first updated fink
>fink selfupdate
rsync -az -q rsync://distfiles.master.finkmirrors.net/finkinfo//TIMESTAMP
/sw/fink/TIMESTAMP.tmp
I will now run the rsync command to retrieve the latest package descriptions.
rsync -rtz --delete-after --delete -q --include='10.4/'
--include='10.4/stable/' --include='10.4/stable/main/'
--include='10.4/stable/main/finkinfo/' --include='10.4/stable/main/finkinfo/*/'
--include='10.4/stable/main/finkinfo/*'
--include='10.4/stable/main/finkinfo/**/*' --include='10.4/'
--include='10.4/stable/' --include='10.4/stable/crypto/'
--include='10.4/stable/crypto/finkinfo/'
--include='10.4/stable/crypto/finkinfo/*/'
--include='10.4/stable/crypto/finkinfo/*'
--include='10.4/stable/crypto/finkinfo/**/*' --include='10.4/'
--include='10.4/unstable/' --include='10.4/unstable/main/'
--include='10.4/unstable/main/finkinfo/'
--include='10.4/unstable/main/finkinfo/*/'
--include='10.4/unstable/main/finkinfo/*'
--include='10.4/unstable/main/finkinfo/**/*' --include='10.4/'
--include='10.4/unstable/' --include='10.4/unstable/crypto/'
--include='10.4/unstable/crypto/finkinfo/'
--include='10.4/unstable/crypto/finkinfo/*/'
--include='10.4/unstable/crypto/finkinfo/*'
--include='10.4/unstable/crypto/finkinfo/**/*' --include='VERSION'
--include='DISTRIBUTION' --include='README' --exclude='**'
'rsync://distfiles.master.finkmirrors.net/finkinfo' '/sw/fink/'
Scanning package description files..........
Information about 9351 packages read in 2 seconds.
No packages to install.
The core packages have been updated. You should now update the other packages
using commands like 'fink update-all'.
I then used the update-all directive to update all installed packages:
>fink update-all
Information about 9351 packages read in 1 seconds.
The following 14 packages will be installed or updated:
bioperl-pm5100 class-c3-pm5100 data-section-pm5100 dbd-sqlite-pm5100
dbi-pm5100 graphviz graphviz-shlibs module-build-pm5100 python26
python26-shlibs spreadsheet-writeexcel-pm test-harness-pm5100
test-simple-pm5100 xml-sax-writer-pm5100
Setting runtime build-lock...
dpkg-deb -b /sw/src/fink.build/root-fink-buildlock-graphviz-2.26.3-2
/sw/src/fink.build
dpkg-deb: baue Paket »fink-buildlock-graphviz-2.26.3-2« in
»/sw/src/fink.build/fink-buildlock-graphviz-2.26.3-2_2010.08.25-21.22.14_darwin-x86_64.deb«.
Installing build-lock package...
/sw/bin/dpkg-lockwait -i
/sw/src/fink.build/fink-buildlock-graphviz-2.26.3-2_2010.08.25-21.22.14_darwin-x86_64.deb
Wähle vormals abgewähltes Paket fink-buildlock-graphviz-2.26.3-2.
(Lese Datenbank ... 38151 Dateien und Verzeichnisse sind derzeit installiert.)
Entpacke fink-buildlock-graphviz-2.26.3-2 (aus
.../fink-buildlock-graphviz-2.26.3-2_2010.08.25-21.22.14_darwin-x86_64.deb) ...
Richte fink-buildlock-graphviz-2.26.3-2 ein (2010.08.25-21.22.14) ...
[...]
libtool: link: (cd .libs/libgvc.lax/libpack_C.a && ar x
"/sw/src/fink.build/graphviz-2.26.3-2/graphviz-2.26.3/lib/gvc/../../lib/pack/.libs/libpack_C.a")
libtool: link: (cd .libs/libgvc.lax/libxdot_C.a && ar x
"/sw/src/fink.build/graphviz-2.26.3-2/graphviz-2.26.3/lib/gvc/../../lib/xdot/.libs/libxdot_C.a")
libtool: link: (cd .libs/libgvc.lax/libcommon_C.a && ar x
"/sw/src/fink.build/graphviz-2.26.3-2/graphviz-2.26.3/lib/gvc/../../lib/common/.libs/libcommon_C.a")
libtool: link: (cd .libs/libgvc.lax/libltdlc.a && ar x
"/sw/src/fink.build/graphviz-2.26.3-2/graphviz-2.26.3/lib/gvc/../../libltdl/.libs/libltdlc.a")
libtool: link: gcc -dynamiclib -o .libs/libgvc.5.dylib .libs/gvrender.o
.libs/gvlayout.o .libs/gvdevice.o .libs/gvloadimage.o .libs/gvcontext.o
.libs/gvjobs.o .libs/gvevent.o .libs/gvplugin.o .libs/gvconfig.o
.libs/gvtextlayout.o .libs/gvusershape.o .libs/gvc.o
.libs/libgvc.lax/libpack_C.a/ccomps.o .libs/libgvc.lax/libpack_C.a/pack.o
.libs/libgvc.lax/libxdot_C.a/xdot.o .libs/libgvc.lax/libcommon_C.a/args.o
.libs/libgvc.lax/libcommon_C.a/arrows.o
.libs/libgvc.lax/libcommon_C.a/colxlate.o .libs/libgvc.lax/libcommon_C.a/emit.o
.libs/libgvc.lax/libcommon_C.a/fontmetrics.o
.libs/libgvc.lax/libcommon_C.a/geom.o .libs/libgvc.lax/libcommon_C.a/globals.o
.libs/libgvc.lax/libcommon_C.a/htmllex.o
.libs/libgvc.lax/libcommon_C.a/htmlparse.o
.libs/libgvc.lax/libcommon_C.a/htmltable.o
.libs/libgvc.lax/libcommon_C.a/input.o .libs/libgvc.lax/libcommon_C.a/labels.o
.libs/libgvc.lax/libcommon_C.a/memory.o .libs/libgvc.lax/libcommon_C.a/ns.o
.libs/libgvc.lax/libcommon_C.a/output.o
.libs/libgvc.lax/libcommon_C.a/pointset.o
.libs/libgvc.lax/libcommon_C.a/postproc.o
.libs/libgvc.lax/libcommon_C.a/psusershape.o
.libs/libgvc.lax/libcommon_C.a/routespl.o
.libs/libgvc.lax/libcommon_C.a/shapes.o
.libs/libgvc.lax/libcommon_C.a/splines.o
.libs/libgvc.lax/libcommon_C.a/timing.o .libs/libgvc.lax/libcommon_C.a/utils.o
.libs/libgvc.lax/libltdlc.a/argz.o .libs/libgvc.lax/libltdlc.a/dlopen.o
.libs/libgvc.lax/libltdlc.a/libltdlc_la-lt__alloc.o
.libs/libgvc.lax/libltdlc.a/libltdlc_la-lt_dlloader.o
.libs/libgvc.lax/libltdlc.a/libltdlc_la-lt_error.o
.libs/libgvc.lax/libltdlc.a/libltdlc_la-ltdl.o
.libs/libgvc.lax/libltdlc.a/libltdlc_la-preopen.o
.libs/libgvc.lax/libltdlc.a/libltdlc_la-slist.o
.libs/libgvc.lax/libltdlc.a/libltdlcS.o -L/sw/lib
../../lib/xdot/.libs/libxdot.dylib ../../lib/cdt/.libs/libcdt.dylib
../../lib/graph/.libs/libgraph.dylib
/sw/src/fink.build/graphviz-2.26.3-2/graphviz-2.26.3/lib/cdt/.libs/libcdt.dylib
../../lib/pathplan/.libs/libpathplan.dylib /sw/lib/libexpat.dylib -lz -lm
-Wl,-framework -Wl,JavaVM -Wl,-framework -Wl,ApplicationServices -Wl,-framework
-Wl,CoreServices -Wl,-dylib_file
-Wl,/sw/lib/libcdt.4.dylib:/sw/src/fink.build/graphviz-2.26.3-2/graphviz-2.26.3/lib/cdt/.libs/libcdt.dylib
-install_name /sw/lib/libgvc.5.dylib -compatibility_version 6
-current_version 6.0 -Wl,-single_module
Undefined symbols:
"_edeflateBound", referenced from:
_gvwrite in gvdevice.o
"_edeflate", referenced from:
_gvdevice_finalize in gvdevice.o
_gvwrite in gvdevice.o
"_ecrc32", referenced from:
_gvwrite in gvdevice.o
_gvdevice_initialize in gvdevice.o
"_edeflateInit2_", referenced from:
_gvdevice_initialize in gvdevice.o
"_edeflateEnd", referenced from:
_gvdevice_finalize in gvdevice.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
make[3]: *** [libgvc.la] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2
### execution of /var/tmp/tmp.1.q564rE failed, exit code 2
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-graphviz-2.26.3-2
(Lese Datenbank ... 38152 Dateien und Verzeichnisse sind derzeit installiert.)
Entferne fink-buildlock-graphviz-2.26.3-2 ...
Failed: phase compiling: graphviz-2.26.3-2 failed
As far as I understand the above output, fink has trouble compiling
graphviz-2.26.3-2. Does anyone know what the cause for this problem could be
and how I could solve it?
Best wishes,
Oliver
PS: I use fink 0.29.13 on Mac OS 10.6.4.
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