> On Nov 29, 2014, at 9:23 AM, Alexander Hansen <alexanderk.han...@gmail.com>
> wrote:
>
>>
>> On Nov 28, 2014, at 9:53 PM, Jessilyn Dunn <jessilyn.d...@gmail.com
>> <mailto:jessilyn.d...@gmail.com>> wrote:
>>
>> Hi,
>> I am having a similar problem installing Bioperl (I used $ fink install
>> bioperl-pm5162)
>>
>> and received the error:
>>
>> Failed: phase compiling: fcgi-pm5162-0.74-1 failed
>>
>> (before this error, everything seemed to be running smoothly... see below)
>> New package:
>> dists/stable/main/binary-darwin-x86_64/web/libtidyp-dev_1.04-1_darwin-x86_64.deb
>> New package:
>> dists/stable/main/binary-darwin-x86_64/web/libtidyp-shlibs_1.04-1_darwin-x86_64.deb
>> New package:
>> dists/stable/main/binary-darwin-x86_64/web/tidyp_1.04-1_darwin-x86_64.deb
>> New package:
>> dists/stable/main/binary-darwin-x86_64/x11/xdg-base_0.8-2_darwin-x86_64.deb
>>
>> For further details, my system information is:
>> Package manager version: 0.38.2
>> Distribution version: selfupdate-rsync Fri Nov 28 18:47:48 2014, 10.10,
>> x86_64
>> Trees: local/main stable/main stable/crypto
>> Xcode.app: 6.1
>> Xcode command-line tools: 6.1.0.0.1.1413057044
>> Max. Fink build jobs: 4
>>
>> Thank you!
>> Jessilyn
>>
>
> I get the following (similar setup):
>
> Generating FCGI.pm
> 2 warnings generated.
> cp FCGI.pm blib/arch/FCGI.pm
> "/usr/bin/arch" -x86_64 perl5.16.2 -x86_64 perl5.16.2 "-Iblib/arch"
> "-Iblib/lib" FCGI.XL FCGI.xs
> "/usr/bin/arch" -x86_64 perl5.16.2 -x86_64 perl5.16.2 "-Iblib/arch"
> "-Iblib/lib" echo.PL echo.fpl
> "/usr/bin/arch" -x86_64 perl5.16.2 -x86_64 perl5.16.2 "-Iblib/arch"
> "-Iblib/lib" remote.PL remote.fpl
> Can't open perl script "perl5.16.2": No such file or directory
> Can't open perl script "perl5.16.2": No such file or directory
> Can't open perl script "perl5.16.2": No such file or directory
> make: *** [remote.fpl] Error 2
>
> This machine was updated from 10.9 to 10.10. I see essentially the same
> error when attempting fcgi-pm5182. Let me know if the configure log will
> help debug this.
> --
> Alexander Hansen, Ph.D.
> Fink User Liaison
We’ve found a workaround, which is to use “fink remove
extutils-makemaker-pm5162” and then to build fcgi-pm5162.
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