Update of /cvsroot/fink/dists/10.2/unstable/main/finkinfo/sci
In directory usw-pr-cvs1:/tmp/cvs-serv28057
Added Files:
dynagraph-1.3e-2.info dynagraph-1.3e-2.patch
freehelix-98-1.info freehelix-98-1.patch
Log Message:
Fixed configure error with dynagraph and latest xforms, new package -freehelix
--- NEW FILE: dynagraph-1.3e-2.info ---
Package: dynagraph
Version: 1.3e
Revision: 2
Maintainer: Matt Stephenson <[EMAIL PROTECTED]>
Depends: libgl, libjpeg-shlibs, libpng-shlibs, libtiff-shlibs, readline-shlibs (>=
4.3-5), xforms-shlibs (>= 1.0-1)
BuildDepends: libjpeg, libpng, libtiff, readline (>= 4.3-5), xforms (>= 1.0-1)
Source: ftp://ftp.math.umbc.edu/pub/rostamian/%n/%n-%v-src.tar.gz
Source-MD5: fc4a8ca8a7c18c08103c7a6a12d2ffc9
SourceDirectory: %n-%v
Patch: %f.patch
SetLDFLAGS: -L/usr/X11R6/lib
SetCFLAGS: -I/usr/X11R6/include
ConfigureParams: --mandir=%i/share/man
DocFiles: BUGS Changes COPYRIGHT GNU-GPL README TODO
Description: 3D plotting utility for X
DescDetail: <<
Dynagraph is a 3D plotting utility for the X Window System. It draws
graphs of mathematical symbolic expressions and numerical data and allows
interactive rotations, zooming, and other manipulations of the displayed
graph.
<<
License: GPL
Homepage: http://www.math.umbc.edu/~rouben/dynagraph
--- NEW FILE: dynagraph-1.3e-2.patch ---
--- dynagraph-1.3e/configure Thu Jul 11 09:59:46 2002
+++ dynagraph-1.3e-patched/configure Fri Oct 18 07:46:44 2002
@@ -3084,13 +3084,13 @@
{ (exit 1); exit 1; }; }
fi
-echo "$as_me:3087: checking for fl_lookup_RGBcolor in -lforms" >&5
-echo $ECHO_N "checking for fl_lookup_RGBcolor in -lforms... $ECHO_C" >&6
+echo "$as_me:3087: checking for fl_lookup_RGBcolor in -lflimage" >&5
+echo $ECHO_N "checking for fl_lookup_RGBcolor in -lflimage... $ECHO_C" >&6
if test "${ac_cv_lib_forms_fl_lookup_RGBcolor+set}" = set; then
echo $ECHO_N "(cached) $ECHO_C" >&6
else
ac_check_lib_save_LIBS=$LIBS
-LIBS="-lforms $LIBS"
+LIBS="-lflimage $LIBS"
cat >conftest.$ac_ext <<_ACEOF
#line 3095 "configure"
#include "confdefs.h"
@@ -3138,7 +3138,7 @@
#define HAVE_LIBFORMS 1
EOF
- LIBS="-lforms $LIBS"
+ LIBS="-lflimage $LIBS"
else
{ { echo "$as_me:3144: error: No function fl_lookup_RGBcolor() in the forms
library.
--- NEW FILE: freehelix-98-1.info ---
Package: freehelix
Version: 98
Revision: 1
Maintainer: Matt Stephenson <[EMAIL PROTECTED]>
BuildDepends: fort77
Source: http://ndbserver.rutgers.edu/NDB/ftp/NDB/programs/%n%v/freehel%v.for
Source2: http://ndbserver.rutgers.edu/NDB/ftp/NDB/programs/%n%v/sel%v.for
Source3: http://ndbserver.rutgers.edu/NDB/ftp/NDB/programs/%n%v/freehel.tex
Source4: http://ndbserver.rutgers.edu/NDB/ftp/NDB/programs/%n%v/test.com
Source5: http://ndbserver.rutgers.edu/NDB/ftp/NDB/programs/%n%v/test.inp
Source-MD5: 6bd8ecb84a087dfad0d3464e204e1a3f
Source2-MD5: 559cc8a1804a7f583766749bd92bb6f5
Source3-MD5: 2e79bba04111965eb6bf5f0917a6736d
Source4-MD5: 718841fe4ef3a6dce5ab55a60b766b5c
Source5-MD5: e8d854a995ff8cb90c4c49d00b498b1b
SourceDirectory: .
PatchScript: sed 's|@prefix@|%p|g' <%a/%f.patch | patch -p1
CompileScript: <<
cp freehel98.for freehel98.f
cp sel98.for sel98.f
fort77 -O3 -w -o freehel98 freehel98.f
fort77 -O3 -o sel98 sel98.f
<<
InstallScript: <<
mkdir -p %i/bin
mkdir -p %i/share/freehelix/examples
install -c -m 755 freehel98 sel98 %i/bin
install -c -m 755 test.com test.inp %i/share/freehelix/examples
<<
DocFiles: freehel.tex
Description: Nucleic acid helix analysis program
DescDetail: <<
Freehelix is a substantially modified version of Newhelix, designed
specifically for the analysis of radically bent and kinked DNA double
helices.
<<
Descusage: <<
For instructions on how to use refer to the document 'freehel.tex' found
in your finkdirectory/share/doc/freehelix. There is an example script
installed in your finkdirectory/share/freehelix/examples.
<<
DescPort: <<
Use fort77 instead of g77 to build due to sel98 crashing with a bus error
when compiled with g77.
<<
License: Restrictive
--- NEW FILE: freehelix-98-1.patch ---
--- ./freehel98.for Thu Nov 4 12:42:00 1999
+++ .-patched/freehel98.for Mon Sep 23 11:35:32 2002
@@ -2349,8 +2349,7 @@
DATA NMAX/2000/,IBL/' '/,ZER/'0'/,O1/'O1'''/,FOUR/'4'/
DATA IST/'*'/
READ(*,'(A80)') INP
- OPEN(UNIT=L11,FILE=INP(1:(index(INP,' ')-1)),STATUS='OLD',
- * READONLY)
+ OPEN(UNIT=L11,FILE=INP(1:(index(INP,' ')-1)),STATUS='OLD')
C OPEN(UNIT=L11,STATUS='OLD',READONLY)
IB=3
NOCH=6
--- ./test.com Thu Nov 4 12:42:00 1999
+++ .-patched/test.com Tue Oct 15 21:21:54 2002
@@ -3,8 +3,8 @@
#*.dat, *.PDB, & *.po4 files have the pdb filename (represented as *) as prefix
#******* enter the pdb file name on the line after the 'END' keyword *******
#
-echo "Executing newhel98 ..."
-freehel97.exe<<eof>test.freehelix
+echo "Executing freehel98 ..."
+@prefix@/bin/freehel98<<eof>test.freehelix
TITL TBPJ C-G-T-A-T-A-T-A-T-A-C-G Juo & Dickerson--Human TBP/DNA
CELL 1., 1., 1., 90., 90., 90.
BRKH
@@ -25,7 +25,7 @@
test.inp
eof
#
-echo "freehel97 finished and output as *.out, *.PDB, *.dat, and *.po4 "
+echo "freehel98 finished and output as *.out, *.PDB, *.dat, and *.po4 "
echo "Executing sel98 ..."
-sel98.exe <test.freehelix >test.sel
+@prefix@/bin/sel98 <test.freehelix >test.sel
echo "sel98 finished. "
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