Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv30095

Modified Files:
        gfan.info gfan.patch 
Log Message:
backport gfan patches from 10.7
https://sourceforge.net/tracker/?func=detail&atid=414256&aid=3534167&group_id=17203

Index: gfan.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/gfan.info,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -d -r1.2 -r1.3
--- gfan.info   14 Jun 2012 14:29:25 -0000      1.2
+++ gfan.info   21 Aug 2012 22:02:36 -0000      1.3
@@ -1,6 +1,6 @@
 Package: gfan
 Version: 0.5
-Revision: 2
+Revision: 3
 Maintainer: Dustin Cartwright <dusti...@users.sourceforge.net>
 HomePage: http://home.imf.au.dk/jensen/software/gfan/gfan.html
 License: GPL
@@ -21,7 +21,7 @@
 Source2-Checksum: SHA1(9ccfc6866384c62c42cc4ccd5cb4d89aa2ddae54)
 SourceDirectory: gfan%v
 PatchFile: %n.patch
-PatchFile-MD5: 1e15350c3926302944fab209e7d5f183
+PatchFile-MD5: f9aa81f34056ccbf0d9b0bb7286126ad
 GCC: 4.0
 CompileScript: <<
   make gmppath=%p cddpath=%p

Index: gfan.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/gfan.patch,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -d -r1.2 -r1.3
--- gfan.patch  14 Jun 2012 14:29:25 -0000      1.2
+++ gfan.patch  21 Aug 2012 22:02:36 -0000      1.3
@@ -19,42 +19,6 @@
  CDD_INCLUDEOPTIONS = -I $(cddpath)/include
  endif
  
-diff -ru gfan0.5/application.cpp gfan0.5-patched/application.cpp
---- gfan0.5/application.cpp
-+++ gfan0.5-patched/application.cpp
-@@ -547,7 +547,7 @@
-       if(strlen(p->name())>0)
-         {
-           char c[1024];
--          sprintf(c,"ln -s %s%s %s%s%s\n",path,name,path,name,p->name());
-+          sprintf(c,"ln -s %s %s%s%s\n",name,path,name,p->name());
-           fprintf(stderr,"%s",c);
-           system(c);
-         }
-diff -ru gfan0.5/testsuite/0056WeildDivisor/command 
gfan0.5-patched/testsuite/0056WeildDivisor/command
---- gfan0.5/testsuite/0056WeildDivisor/command
-+++ gfan0.5-patched/testsuite/0056WeildDivisor/command
-@@ -1 +1 @@
--%s _tropicalhypersurface >temp1.poly ; %s _tropicalweildivisor -i1 temp1.poly 
-i2 func.poly > temp2.poly ; %s _tropicalweildivisor -i1 temp2.poly -i2 
func.poly | grep MULTIPLICITIES -A1
-+%s _tropicalhypersurface >temp1.poly ; %s _tropicalweildivisor -i1 temp1.poly 
-i2 testsuite/0056WeildDivisor/func.poly > temp2.poly ; %s _tropicalweildivisor 
-i1 temp2.poly -i2 testsuite/0056WeildDivisor/func.poly | grep MULTIPLICITIES 
-A1
-diff -ru gfan0.5/testsuite/0507InitialIdeal/command 
gfan0.5-patched/testsuite/0507InitialIdeal/command
---- gfan0.5/testsuite/0507InitialIdeal/command
-+++ gfan0.5-patched/testsuite/0507InitialIdeal/command
-@@ -1 +1 @@
--gfan _overintegers --initialIdeal -m
-+%s _overintegers --initialIdeal -m
-diff -ru gfan0.5/testsuite/0508IntegerGroebnerCone/command 
gfan0.5-patched/testsuite/0508IntegerGroebnerCone/command
---- gfan0.5/testsuite/0508IntegerGroebnerCone/command
-+++ gfan0.5-patched/testsuite/0508IntegerGroebnerCone/command
-@@ -1 +1 @@
--gfan _overintegers --groebnerCone | grep N_RAYS -v | grep RAYS -A3 | sort
-+%s _overintegers --groebnerCone | grep N_RAYS -v | grep RAYS -A3 | sort
-diff -ru gfan0.5/testsuite/0509IntegerGroebnerFan/command 
gfan0.5-patched/testsuite/0509IntegerGroebnerFan/command
---- gfan0.5/testsuite/0509IntegerGroebnerFan/command
-+++ gfan0.5-patched/testsuite/0509IntegerGroebnerFan/command
-@@ -1 +1 @@
--gfan _overintegers --groebnerFan |grep F_VECTOR
-+%s _overintegers --groebnerFan |grep F_VECTOR
 diff -ru gfan0.5/app_intsinpolytope.cpp gfan0.5-patched/app_intsinpolytope.cpp
 --- gfan0.5/app_intsinpolytope.cpp
 +++ gfan0.5-patched/app_intsinpolytope.cpp
@@ -88,6 +52,17 @@
  
      bool isGroebnerBasis=false;
      int counter=0;
+diff -ru gfan0.5/app_minkowski.cpp gfan0.5-patched/app_minkowski.cpp
+--- gfan0.5/app_minkowski.cpp
++++ gfan0.5-patched/app_minkowski.cpp
+@@ -160,7 +160,6 @@
+           //log0 fprintf(Stderr,"4");
+           f.insert(c);
+           //log0 fprintf(Stderr,"5\n");
+-          static int i;
+           //log0 fprintf(Stderr,"inserted:%i\n",++i);
+         }
+       log1 fprintf(Stderr,"Resolving symmetries.\n");
 diff -ru gfan0.5/app_normalfancleanup.cpp 
gfan0.5-patched/app_normalfancleanup.cpp
 --- gfan0.5/app_normalfancleanup.cpp
 +++ gfan0.5-patched/app_normalfancleanup.cpp
@@ -154,6 +129,18 @@
        log1 fprintf(Stderr,"Number of maximal cones: 
%i\n",f.numberOfMaximalCones());
        log1 fprintf(Stderr,"Modulo the homogeneity space:\n");
        log1 AsciiPrinter(Stderr).printVectorList(hv);
+diff -ru gfan0.5/application.cpp gfan0.5-patched/application.cpp
+--- gfan0.5/application.cpp
++++ gfan0.5-patched/application.cpp
+@@ -547,7 +547,7 @@
+       if(strlen(p->name())>0)
+         {
+           char c[1024];
+-          sprintf(c,"ln -s %s%s %s%s%s\n",path,name,path,name,p->name());
++          sprintf(c,"ln -s %s %s%s%s\n",name,path,name,p->name());
+           fprintf(stderr,"%s",c);
+           system(c);
+         }
 diff -ru gfan0.5/bergman.cpp gfan0.5-patched/bergman.cpp
 --- gfan0.5/bergman.cpp
 +++ gfan0.5-patched/bergman.cpp
@@ -255,6 +242,17 @@
  
    return intersection;
  }
+diff -ru gfan0.5/linalgfloat.h gfan0.5-patched/linalgfloat.h
+--- gfan0.5/linalgfloat.h
++++ gfan0.5-patched/linalgfloat.h
+@@ -13,6 +13,7 @@
+ 
+ namespace linalgfloat
+ {
++class Matrix;
+ class Vector{
+     int n;
+     std::vector<typ> data;
 diff -ru gfan0.5/lp_cdd.cpp gfan0.5-patched/lp_cdd.cpp
 --- gfan0.5/lp_cdd.cpp
 +++ gfan0.5-patched/lp_cdd.cpp
@@ -323,6 +321,30 @@
    P.printString("Done printing SymmetryGroup.\n");
  }
  
+diff -ru gfan0.5/testsuite/0056WeildDivisor/command 
gfan0.5-patched/testsuite/0056WeildDivisor/command
+--- gfan0.5/testsuite/0056WeildDivisor/command
++++ gfan0.5-patched/testsuite/0056WeildDivisor/command
+@@ -1 +1 @@
+-%s _tropicalhypersurface >temp1.poly ; %s _tropicalweildivisor -i1 temp1.poly 
-i2 func.poly > temp2.poly ; %s _tropicalweildivisor -i1 temp2.poly -i2 
func.poly | grep MULTIPLICITIES -A1
++%s _tropicalhypersurface >temp1.poly ; %s _tropicalweildivisor -i1 temp1.poly 
-i2 testsuite/0056WeildDivisor/func.poly > temp2.poly ; %s _tropicalweildivisor 
-i1 temp2.poly -i2 testsuite/0056WeildDivisor/func.poly | grep MULTIPLICITIES 
-A1
+diff -ru gfan0.5/testsuite/0507InitialIdeal/command 
gfan0.5-patched/testsuite/0507InitialIdeal/command
+--- gfan0.5/testsuite/0507InitialIdeal/command
++++ gfan0.5-patched/testsuite/0507InitialIdeal/command
+@@ -1 +1 @@
+-gfan _overintegers --initialIdeal -m
++%s _overintegers --initialIdeal -m
+diff -ru gfan0.5/testsuite/0508IntegerGroebnerCone/command 
gfan0.5-patched/testsuite/0508IntegerGroebnerCone/command
+--- gfan0.5/testsuite/0508IntegerGroebnerCone/command
++++ gfan0.5-patched/testsuite/0508IntegerGroebnerCone/command
+@@ -1 +1 @@
+-gfan _overintegers --groebnerCone | grep N_RAYS -v | grep RAYS -A3 | sort
++%s _overintegers --groebnerCone | grep N_RAYS -v | grep RAYS -A3 | sort
+diff -ru gfan0.5/testsuite/0509IntegerGroebnerFan/command 
gfan0.5-patched/testsuite/0509IntegerGroebnerFan/command
+--- gfan0.5/testsuite/0509IntegerGroebnerFan/command
++++ gfan0.5-patched/testsuite/0509IntegerGroebnerFan/command
+@@ -1 +1 @@
+-gfan _overintegers --groebnerFan |grep F_VECTOR
++%s _overintegers --groebnerFan |grep F_VECTOR
 diff -ru gfan0.5/xfig.cpp gfan0.5-patched/xfig.cpp
 --- gfan0.5/xfig.cpp
 +++ gfan0.5-patched/xfig.cpp


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