Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/libs/pythonmods
In directory sfp-cvs-1.v30.ch3.sourceforge.com:/tmp/cvs-serv25450
Added Files:
pysam-py.info
Log Message:
new packages for next generation sequencing analysis
--- NEW FILE: pysam-py.info ---
Info2: <<
Package: pysam-py%type_pkg[python]
Version: 0.6
Revision: 3
Maintainer: Hanspeter Niederstrasser <[email protected]>
Type: python (2.6 2.7)
Depends: <<
pyrex-py%type_pkg[python] (>= 0.9.8),
python%type_pkg[python],
samtools (>= 0.1.18)
<<
Source: http://pysam.googlecode.com/files/pysam-%v.tar.gz
Source-MD5: 395f59d7b765d9f625f6d82fce905dc7
PatchScript: <<
### clang doesn't like inline void
perl -pi -e 's|inline void __ks_insertsort_|static inline void
__ks_insertsort_|g' samtools/ksort.h
<<
CompileScript: <<
%p/bin/python%type_raw[python] setup.py build
<<
InstallScript: <<
%p/bin/python%type_raw[python] setup.py install --root %d
<<
DocFiles: COPYING INSTALL THANKS
Description: SAM/BAM sequence alignment python interface
DescDetail: <<
Module for reading and manipulating Samfiles. It's a lightweight
wrapper of the samtools C-API. Pysam also includes an interface
for tabix.
<<
License: BSD
Homepage: http://code.google.com/p/pysam/
<<
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