Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory sfp-cvs-1.v30.ch3.sourceforge.com:/tmp/cvs-serv26007
Added Files:
cd-hit.info
Log Message:
new pkg cd-hit 4.6.1-2012-08-27
--- NEW FILE: cd-hit.info ---
Package: cd-hit
Version: 4.6.1-2012-08-27
Revision: 1
Description: Sequence clustering software
License: GPL
Maintainer: Hanspeter Niederstrasser <nie...@users.sourceforge.net>
Depends: <<
gcc48-shlibs,
openmpi-shlibs
<<
BuildDepends: <<
openmpi
<<
Source: https://cdhit.googlecode.com/files/cd-hit-v%v.tgz
Source-MD5: 4042ed882353ed6c2938931ce9259a5c
Source-Checksum: SHA1(744be987a963e368ad46efa59227ea313c35ef5d)
GCC: 4.0
CompileScript: <<
make openmp=yes CC=mpic++
<<
InstallScript: <<
mkdir -p %i/bin
make install PREFIX=%i/bin
<<
DocFiles: ChangeLog README doc/cdhit-user-guide.pdf
Homepage: http://weizhong-lab.ucsd.edu/cd-hit/
DescDetail: <<
CD-HI/CD-HIT clusters protein sequence database at high sequence identity
threshold. This program can remove the high sequence redundance efficiently.
cd-hit groups proteins into clusters that meet a user-defined similarity
threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide
sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but
designed to compare two nucleotide datasets.
<<
------------------------------------------------------------------------------
See everything from the browser to the database with AppDynamics
Get end-to-end visibility with application monitoring from AppDynamics
Isolate bottlenecks and diagnose root cause in seconds.
Start your free trial of AppDynamics Pro today!
http://pubads.g.doubleclick.net/gampad/clk?id=48808831&iu=/4140/ostg.clktrk
_______________________________________________
Fink-commits mailing list
Fink-commits@lists.sourceforge.net
http://news.gmane.org/gmane.os.apple.fink.cvs
