Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory sfp-cvs-1.v30.ch3.sourceforge.com:/tmp/cvs-serv5958
Modified Files:
rdkit.info
Log Message:
updated to use boot1.53
Index: rdkit.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/rdkit.info,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -d -r1.3 -r1.4
--- rdkit.info 27 Jul 2013 17:02:47 -0000 1.3
+++ rdkit.info 29 Jul 2013 01:55:32 -0000 1.4
@@ -1,13 +1,11 @@
Package: rdkit
Version: 2013.03.2
-Revision: 1
+Revision: 3
Distribution: 10.6, 10.7, 10.8
GCC: 4.0
BuildDependsOnly: false
Source: mirror:sourceforge:rdkit/RDKit_2013_03_2.tgz
Source-MD5: b5cff9fb70124e544d2e26ea16c92d95
-Source2: mirror:sourceforge:boost/boost_1_53_0.tar.bz2
-Source2-MD5: a00d22605d5dbcfb4c9936a9b35bc4c2
Description: Cheminformatics and machine-learning software
DescDetail: <<
A collection of cheminformatics and machine-learning software written in C++
@@ -18,44 +16,14 @@
similarity searches.
<<
BuildConflicts: boost1.35.nopython, boost1.35.python26, boost1.35.python27,
boost1.35.systempython, boost1.46.cmake, boost-jam, boost1.46.1.cmake,
boost1.52.0.cmake, boost1.52.0.cmake-shlibs
-Depends: %N-shlibs, python27-shlibs, numpy-py27, sqlite3-shlibs, pil-py27
-BuildDepends: python27, numpy-py27, sqlite3-dev, cmake
+Depends: %N-shlibs, python27-shlibs, numpy-py27, sqlite3-shlibs, pil-py27,
boost1.53.python27-shlibs
+BuildDepends: python27, numpy-py27, sqlite3-dev, cmake, boost1.53.python27
CompileScript: <<
#!/bin/sh -efv
-#
-# First build a more current boost libboost_python library and we will put it
in the rdkit
-# library subdirectory to avoid confusion
-#
-RDKIT_ROOT="$PWD"
-cd ../boost_1_53_0
-BOOSTROOT="$PWD"
-./bootstrap.sh --with-libraries="python,regex" --with-python-root=%p
--with-python=%p/bin/python2.7 --prefix="$PWD"
-#
-./b2 install --prefix="$BOOSTROOT"
-cd lib
-# Despite the above it links to the system python, so fix that and give it a
proper instal name id
-install_name_tool -change
/System/Library/Frameworks/Python.framework/Versions/2.7/Python
%p/lib/python2.7/config/libpython2.7.dylib libboost_python.dylib
-install_name_tool -id %p/lib/rdkit/libboost_python.dylib
libboost_python.dylib
-#
-#
-install_name_tool -change
/System/Library/Frameworks/Python.framework/Versions/2.7/Python
%p/lib/python2.7/config/libpython2.7.dylib libboost_regex.dylib
-install_name_tool -id %p/lib/rdkit/libboost_regex.dylib libboost_regex.dylib
-#
-#
-# Now for rdkit itself
-#
-cd "$RDKIT_ROOT"
mkdir build
cd build
-cmake -DCMAKE_OSX_SYSROOT:PATH="/" -DCMAKE_OSX_DEPLOYMENT_TARGET:STRING=""
-DCMAKE_INSTALL_PREFIX=%p -DCMAKE_INSTALL_NAME_DIR=%p/lib/%n
-DCMAKE_PREFIX_PATH=%p -DBOOST_ROOT="$BOOSTROOT" -DBoost_NO_SYSTEM_PATHS=ON
-DPYTHON_LIBRARY=%p/lib/python2.7/config/libpython2.7.dylib
-DPYTHON_INCLUDE_DIR=%p/include/python2.7 -DPYTHON_EXECUTABLE=%p/bin/python2.7
..
-# NUMPROC="$(sysctl -n hw.ncpu)"
-# make -j $NUMPROC install
- make install
-#
-# We only require the boost_python library and boost_regex library
-cp "$BOOSTROOT"/lib/libboost_python.dylib
"$RDKIT_ROOT"/lib/libboost_python.dylib
-cp "$BOOSTROOT"/lib/libboost_regex.dylib
"$RDKIT_ROOT"/lib/libboost_regex.dylib
-cp -R "$BOOSTROOT"/boost "$RDKIT_ROOT"/Code/.
+cmake -DCMAKE_OSX_SYSROOT:PATH="/" -DCMAKE_OSX_DEPLOYMENT_TARGET:STRING=""
-DCMAKE_INSTALL_PREFIX=%p -DCMAKE_INSTALL_NAME_DIR=%p/lib/%n
-DCMAKE_PREFIX_PATH=%p -DBOOST_LIBRARYDIR="%p/lib/python2.7/site-packages"
-DBOOST_ROOT="%p/lib/boost-1_53" -DBoost_NO_SYSTEM_PATHS=ON
-DPYTHON_LIBRARY=%p/lib/python2.7/config/libpython2.7.dylib
-DPYTHON_INCLUDE_DIR=%p/include/python2.7 -DPYTHON_EXECUTABLE=%p/bin/python2.7
..
+make install
<<
InstallScript: <<
#!/bin/sh -efv
@@ -64,21 +32,15 @@
cp -R rdkit %i/lib/python2.7/site-packages/.
mkdir -p %i/lib
cp -R lib %i/lib/%n
-mkdir -p %i/include
-cp -R Code %i/include/%n
<<
SplitOff: <<
Package: %N-shlibs
Description: rdkit dynamic libraries
Files:<<
lib/%N/*.%v.dylib
- lib/%N/*.1.dylib
- lib/%N/libboost_python.dylib
- lib/%N/libboost_regex.dylib
+ lib/%N/*.1.dylib
<<
Shlibs: <<
- %p/lib/%N/libboost_python.dylib 0.0.0 %n (>=
0.0.0-1)
- %p/lib/%N/libboost_regex.dylib 0.0.0 %n (>=
0.0.0-1)
%p/lib/%N/libAlignment.1.dylib 1.0.0 %n (>=
2013.03.2-1)
%p/lib/%N/libCatalogs.1.dylib 1.0.0 %n (>=
2013.03.2-1)
%p/lib/%N/libChemReactions.1.dylib 1.0.0 %n (>=
2013.03.2-1)
@@ -121,7 +83,6 @@
Description: rdkit static libraries and headers
Files:<<
lib/%N/*.a
- include/%N/*
<<
DocFiles: license.txt README
License: BSD
------------------------------------------------------------------------------
See everything from the browser to the database with AppDynamics
Get end-to-end visibility with application monitoring from AppDynamics
Isolate bottlenecks and diagnose root cause in seconds.
Start your free trial of AppDynamics Pro today!
http://pubads.g.doubleclick.net/gampad/clk?id=48808831&iu=/4140/ostg.clktrk
_______________________________________________
Fink-commits mailing list
Fink-commits@lists.sourceforge.net
http://news.gmane.org/gmane.os.apple.fink.cvs
