Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory sfp-cvs-1.v30.ch3.sourceforge.com:/tmp/cvs-serv13666
Modified Files:
coot.info rdkit.info
Log Message:
fix rdkit and coot to work with new boost1.53
Index: rdkit.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/rdkit.info,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -d -r1.4 -r1.5
--- rdkit.info 29 Jul 2013 01:55:32 -0000 1.4
+++ rdkit.info 30 Jul 2013 06:55:48 -0000 1.5
@@ -1,6 +1,6 @@
Package: rdkit
Version: 2013.03.2
-Revision: 3
+Revision: 4
Distribution: 10.6, 10.7, 10.8
GCC: 4.0
BuildDependsOnly: false
@@ -16,7 +16,7 @@
similarity searches.
<<
BuildConflicts: boost1.35.nopython, boost1.35.python26, boost1.35.python27,
boost1.35.systempython, boost1.46.cmake, boost-jam, boost1.46.1.cmake,
boost1.52.0.cmake, boost1.52.0.cmake-shlibs
-Depends: %N-shlibs, python27-shlibs, numpy-py27, sqlite3-shlibs, pil-py27,
boost1.53.python27-shlibs
+Depends: %N-shlibs (= %v-%r), python27-shlibs, numpy-py27, sqlite3-shlibs,
pil-py27, boost1.53.python27-shlibs
BuildDepends: python27, numpy-py27, sqlite3-dev, cmake, boost1.53.python27
CompileScript: <<
#!/bin/sh -efv
@@ -32,6 +32,12 @@
cp -R rdkit %i/lib/python2.7/site-packages/.
mkdir -p %i/lib
cp -R lib %i/lib/%n
+mkdir -p %i/include
+cp -R Code %i/include/%n
+cp -R Contrib/PBF %i/include/%n/.
+cp -R External/AvalonTools %i/include/%n/.
+cp -R External/INCHI-API %i/include/%n/.
+cp -R External/cmim-1.0 %i/include/%n/.
<<
SplitOff: <<
Package: %N-shlibs
@@ -83,6 +89,7 @@
Description: rdkit static libraries and headers
Files:<<
lib/%N/*.a
+ include/%N/*
<<
DocFiles: license.txt README
License: BSD
Index: coot.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/coot.info,v
retrieving revision 1.22
retrieving revision 1.23
diff -u -d -r1.22 -r1.23
--- coot.info 6 Jul 2013 18:55:56 -0000 1.22
+++ coot.info 30 Jul 2013 06:55:48 -0000 1.23
@@ -1,6 +1,6 @@
Package: coot
Version: 0.7.1.0
-Revision: 1
+Revision: 2
SourceDirectory: %n-0.7.1
Distribution: 10.6, 10.7, 10.8
GCC: 4.0
@@ -38,6 +38,7 @@
Recommends: povray, ccp4, raster3d
BuildDepends: <<
fink (>= 0.24.12) ,
+ boost1.53.python27 (>= 1.53.0-1),
clipper-dev (>= 1:2.1-32) ,
gpp4-dev (>= 1.2.0-32) ,
mmdb-dev (>= 1.25.0-32) ,
@@ -78,14 +79,15 @@
pygtk2-gtk-py27-dev ,
pygobject2-py27-dev ,
python27 ,
- rdkit-dev ,
- rdkit ,
+ rdkit-dev (>= 2013.03.2-4) ,
+ rdkit (>= 2013.03.2-4) ,
swig ,
x11-dev
<<
#
Depends: <<
coot-shlibs (= 0.7.1.0-%r) ,
+ boost1.53.python27-shlibs (>= 1.53.0-1),
clipper-shlibs (>= 1:2.1-32) ,
gpp4-shlibs (>= 1.2.0-32) ,
mmdb-shlibs (>= 1.25.0-32) ,
@@ -123,7 +125,7 @@
pango1-xft2-ft219-shlibs (>= 1.24.5-4) ,
pygtk2-gtk-py27 ,
python27 ,
- rdkit ,
+ rdkit-shlibs (>= 2013.03.2-4) ,
x11
<<
#
@@ -167,7 +169,7 @@
rdkit_prefix=%p \
FLIBS="-L%p/lib -L%p/lib/rdkit" \
CPPFLAGS="-I%p/include/rdkit -I%b/lidia-core -I%p/include/libglade-2.0/glade
-I%p/include/libglade-2.0 -I%p/include/python2.7 -I%p/include/mmdb
-I%p/include/ssm -I%p/include/gpp4/ccp4 -I%p/include/clipper -I%p/include
-I/usr/X11R6/include" \
-
LDFLAGS="-Wl,-dylib_file,%p/lib/python2.7/config/libpython2.7.dylib:%p/lib/libsfftw.2.0.7.dylib:%p/lib/libsrfftw.2.0.7.dylib:%p/lib/pango-ft219/lib/libpango-1.0.dylib:%p/lib/pango-ft219/lib/libpangocairo-1.0.dylib:%p/lib/pango-ft219/lib/libpangoft2-1.0.dylib:%p/lib/pango-ft219/lib/libpangox-1.0.dylib:%p/lib/pango-ft219/lib/libpangoxft-1.0.dylib
-L%p/lib -L/usr/lib -flat_namespace
-L/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries" \
+
LDFLAGS="-Wl,-dylib_file,%p/lib/libboost_python.dylib:%p/lib/python2.7/site-packages/libboost_python-1_53.dylib:%p/lib/python2.7/config/libpython2.7.dylib:%p/lib/libsfftw.2.0.7.dylib:%p/lib/libsrfftw.2.0.7.dylib:%p/lib/pango-ft219/lib/libpango-1.0.dylib:%p/lib/pango-ft219/lib/libpangocairo-1.0.dylib:%p/lib/pango-ft219/lib/libpangoft2-1.0.dylib:%p/lib/pango-ft219/lib/libpangox-1.0.dylib:%p/lib/pango-ft219/lib/libpangoxft-1.0.dylib
-L%p/lib -L/usr/lib -flat_namespace
-L/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries" \
DYLD_LIBRARY_PATH="" \
RDKIT_CXXFLAGS=-I$rdkit_prefix/include/rdkit \
RDKIT_LIBS="\"-L%p/lib/rdkit $rdkit_libs\"" \
------------------------------------------------------------------------------
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