Update of /cvsroot/fink/dists/10.3/unstable/main/finkinfo/sci
In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv1958
Modified Files:
ccp4.info ccp4.patch
Log Message:
ccp4 update to current patch release 10.3 unstable sci
Index: ccp4.info
===================================================================
RCS file: /cvsroot/fink/dists/10.3/unstable/main/finkinfo/sci/ccp4.info,v
retrieving revision 1.25
retrieving revision 1.26
diff -u -d -r1.25 -r1.26
--- ccp4.info 1 Mar 2005 00:20:35 -0000 1.25
+++ ccp4.info 16 Mar 2005 21:51:16 -0000 1.26
@@ -1,8 +1,8 @@
Package: ccp4
Version: 5.0.2
-Revision: 13
+Revision: 14
#
-# Revision 13 includes these post-release patches obtained from CCP4 web site
Feb 27, 2005.
+# Revision 14 includes these post-release patches obtained from CCP4 web site
March 15, 2005.
#
# CCP4_utils-25Aug2004.tcl.diff cmtzlib_f-10Aug2004.c.diff
lsqkab-9Aug2004.f.diff
# abs.f-18Aug2004.f dmmulti-12Aug2004.f.diff
refmac5-13Aug2004.tcl.diff
@@ -10,7 +10,8 @@
# pdb_utils-17Sep2004.tcl maprot-20Sep2004.f
mapmask-20Sep2004.f
# ccp4i/templates/mapmask.com ccp4i mail interface fixed to work with OSX
Mail.app
# autosnd-15Nov2004.f cmtzlib_f-24Dec2004.c.diff
cmtzlib_f-14Jan2005.c
-# ncsref-26Jan2005.script.diff
+# ncsref-26Jan2005.script.diff truncate-02Mar2005.com.diff
truncate-02Mar2005.def.diff
+# truncate-02Mar2005.tcl.diff`
#
#
Source: ftp://ftp.%n.ac.uk/%n/current/packed/%n-%v.tar.gz
@@ -130,7 +131,7 @@
License agreement is part of configure file -- print out form and mail in,
additional comments at http://chemistry.ucsc.edu/~wgscott/xtal/page5.html
CCP4 files will be installed under /sw/share/xtal/ccp4-5.0.2
-This revision includes all available CCP4 patches as of Feb. 27, 2005,
+This revision includes all available CCP4 patches as of March 15, 2005,
and new bash and zsh command completions specific to ccp4.
<<
DocFiles: README CHANGES COPYING PROBLEMS INSTALL INSTALL.html INSTALL.ps
ccp4i_installation.html academic_software_licence.pdf
academic_software_licence.ps.gz academic_software_licence.rtf
Index: ccp4.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.3/unstable/main/finkinfo/sci/ccp4.patch,v
retrieving revision 1.15
retrieving revision 1.16
diff -u -d -r1.15 -r1.16
--- ccp4.patch 1 Mar 2005 00:20:35 -0000 1.15
+++ ccp4.patch 16 Mar 2005 21:51:16 -0000 1.16
@@ -282,6 +282,63 @@
}
}
# Check that all domains are defined
+diff -ruN ccp4-5.0.2-orig/ccp4i/tasks/truncate.def
ccp4-5.0.2/ccp4i/tasks/truncate.def
+--- ccp4-5.0.2-orig/ccp4i/tasks/truncate.def 2004-01-26 03:24:18.000000000
-0800
++++ ccp4-5.0.2/ccp4i/tasks/truncate.def 2005-03-15 21:37:13.000000000
-0800
+@@ -6,7 +6,7 @@
+ # A copy of the CCP4 licence can be obtained by writing to the
+ # CCP4 Secretary, Daresbury Laboratory, Warrington WA4 4AD, UK.
+ #
+-#CCP4i_cvs_Id $Id$
++#CCP4i_cvs_Id $Id$
+ #CCP4I SCRIPT DEF truncate
+ #CCP4I DATE 25/10/97 16:05:30
+ #CCP4I USER lizp
+@@ -23,10 +23,10 @@
+
+ IMEANIN _mtz_label_j ""
+ SIGIMEANIN _mtz_label_sig ""
+-I+ _mtz_label_j ""
+-SIGI+ _mtz_label_sig ""
+-I- _mtz_label_j ""
+-SIGI- _mtz_label_sig ""
++Ipp _mtz_label_j ""
++SIGIpp _mtz_label_sig ""
++Imm _mtz_label_j ""
++SIGImm _mtz_label_sig ""
+ FMEANIN _mtz_label_f ""
+ SIGFMEANIN _mtz_label_sig ""
+
+diff -ruN ccp4-5.0.2-orig/ccp4i/tasks/truncate.tcl
ccp4-5.0.2/ccp4i/tasks/truncate.tcl
+--- ccp4-5.0.2-orig/ccp4i/tasks/truncate.tcl 2004-01-26 03:24:18.000000000
-0800
++++ ccp4-5.0.2/ccp4i/tasks/truncate.tcl 2005-03-15 21:37:39.000000000
-0800
+@@ -6,7 +6,7 @@
+ # A copy of the CCP4 licence can be obtained by writing to the
+ # CCP4 Secretary, Daresbury Laboratory, Warrington WA4 4AD, UK.
+ #
+-#CCP4i_cvs_Id $Id$
++#CCP4i_cvs_Id $Id$
+ # ======================================================================
+ # truncate.tcl --
+ #
+@@ -352,13 +352,13 @@
+
+ CreateLabinLine line \
+ "Choose input anomalous intensity (I(+)) and sigma (SIGI(+))" \
+- HKLIN "I(+)" I+ "I(+)" \
+- -sigma "SigI(+)" SIGI+ {}
++ HKLIN "I(+)" Ipp "I(+)" \
++ -sigma "SigI(+)" SIGIpp {}
+
+ CreateLabinLine line \
+ "Choose input anomalous intensity (I(-)) and sigma (SIGI(-))" \
+- HKLIN "I(-)" I- "I(-)" \
+- -sigma "SigI(-)" SIGI- {}
++ HKLIN "I(-)" Imm "I(-)" \
++ -sigma "SigI(-)" SIGImm {}
+
+ CloseSubFrame
+
diff -ruN ccp4-5.0.2-orig/ccp4i/templates/mapmask.com
ccp4-5.0.2/ccp4i/templates/mapmask.com
--- ccp4-5.0.2-orig/ccp4i/templates/mapmask.com 2004-01-26
03:27:54.000000000 -0800
+++ ccp4-5.0.2/ccp4i/templates/mapmask.com 2004-10-11 08:18:35.000000000
-0700
@@ -294,6 +351,29 @@
$IFBORDER BORDER $BORDER
{ ![StringSame $EXTEND_MODE DEFAULT] } EXTEND $EXTEND_MODE
+diff -ruN ccp4-5.0.2-orig/ccp4i/templates/truncate.com
ccp4-5.0.2/ccp4i/templates/truncate.com
+--- ccp4-5.0.2-orig/ccp4i/templates/truncate.com 2004-01-26
03:27:58.000000000 -0800
++++ ccp4-5.0.2/ccp4i/templates/truncate.com 2005-03-15 21:37:54.000000000
-0800
+@@ -6,7 +6,7 @@
+ # A copy of the CCP4 licence can be obtained by writing to the
+ # CCP4 Secretary, Daresbury Laboratory, Warrington WA4 4AD, UK.
+ #
+-#CCP4i_cvs_Id $Id$
++#CCP4i_cvs_Id $Id$
+ { [ IfSet $TITLE ] } title $TITLE
+ $SYMMETRY symmetry $SPACE_GROUP
+ $CELL cell $CELL_1 $CELL_2 $CELL_3 $CELL_4 $CELL_5 $CELL_6
+@@ -44,8 +44,8 @@
+ IF { ![StringSame $INPUT_DATA AMPLITUDES] }
+ 1 labin IMEAN=$IMEANIN SIGIMEAN=$SIGIMEANIN
+ IF $ANOMALOUS
+- - 1 I(+)= $I+ I(-)= $I-
+- - 1 SIGI(+)= $SIGI+ SIGI(-) = $SIGI-
++ - 1 I(+)=$Ipp I(-)=$Imm
++ - 1 SIGI(+)=$SIGIpp SIGI(-)=$SIGImm
+ ENDIF
+ ELSE
+ 1 labin F=$FMEANIN SIGF=$SIGFMEANIN
diff -ruN ccp4-5.0.2-orig/ccp4i/utils/pdb_utils.tcl
ccp4-5.0.2/ccp4i/utils/pdb_utils.tcl
--- ccp4-5.0.2-orig/ccp4i/utils/pdb_utils.tcl 2004-01-26 03:33:53.000000000
-0800
+++ ccp4-5.0.2/ccp4i/utils/pdb_utils.tcl 2004-09-19 14:35:40.000000000
-0700
-------------------------------------------------------
SF email is sponsored by - The IT Product Guide
Read honest & candid reviews on hundreds of IT Products from real users.
Discover which products truly live up to the hype. Start reading now.
http://ads.osdn.com/?ad_id=6595&alloc_id=14396&op=click
_______________________________________________
Fink-commits mailing list
Fink-commits@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/fink-commits
