Update of /cvsroot/fink/dists/10.4-transitional/unstable/main/finkinfo/sci
In directory
sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv16632/10.4-transitional/unstable/main/finkinfo/sci
Modified Files:
infernal.info infernal.patch
Log Message:
sync gcc4 fixes
Index: infernal.info
===================================================================
RCS file:
/cvsroot/fink/dists/10.4-transitional/unstable/main/finkinfo/sci/infernal.info,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -d -r1.5 -r1.6
--- infernal.info 22 Feb 2006 19:02:25 -0000 1.5
+++ infernal.info 9 Mar 2006 00:58:43 -0000 1.6
@@ -1,6 +1,6 @@
Package: infernal
Version: 0.7
-Revision: 1
+Revision: 2
Source: ftp://ftp.genetics.wustl.edu/pub/eddy/software/%n/%n.tar.gz
Source-MD5: 092602a4ce64b0595f8e69a46955d9c4
SourceRename: %n-%v.tar.gz
@@ -35,6 +35,8 @@
Remove variable symbol declaration from easel.h that
is different type than its easel.c usage and that isn't
used anywhere else.
+
+ Fix nested functions error.
<<
DescPackaging: <<
Only rigfilters, which is disabled, is C++.
Index: infernal.patch
===================================================================
RCS file:
/cvsroot/fink/dists/10.4-transitional/unstable/main/finkinfo/sci/infernal.patch,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- infernal.patch 22 Feb 2006 19:02:25 -0000 1.1
+++ infernal.patch 9 Mar 2006 00:58:43 -0000 1.2
@@ -1,6 +1,6 @@
-diff -Nurd -x'*~' infernal-0.7.orig/easel/easel.h.in
infernal-0.7/easel/easel.h.in
---- infernal-0.7.orig/easel/easel.h.in 2005-12-13 15:32:33.000000000 -0500
-+++ infernal-0.7/easel/easel.h.in 2006-02-22 13:53:44.000000000 -0500
+diff -Naur infernal-0.7/easel/easel.h.in infernal-0.7-0001/easel/easel.h.in
+--- infernal-0.7/easel/easel.h.in 2005-12-13 15:32:33.000000000 -0500
++++ infernal-0.7-0001/easel/easel.h.in 2006-03-08 18:20:49.000000000 -0500
@@ -136,7 +136,7 @@
typedef void (*esl_error_handler_f)(int code, char *file, int line,
@@ -10,3 +10,20 @@
extern void esl_error(int code, char *file, int line, char *format, ...);
extern void esl_error_SetHandler(esl_error_handler_f);
+diff -Naur infernal-0.7/squid/configure infernal-0.7-0001/squid/configure
+--- infernal-0.7/squid/configure 2005-12-13 15:32:37.000000000 -0500
++++ infernal-0.7-0001/squid/configure 2006-03-08 18:21:32.000000000 -0500
+@@ -5838,13 +5838,7 @@
+ cat >>conftest.$ac_ext <<_ACEOF
+ /* end confdefs.h. */
+ #include <stdio.h>
+-int
+-main ()
+-{
+ int main(void) { fpos_t f1, f2; if (f1 == f2) f1 = 0;}
+- ;
+- return 0;
+-}
+ _ACEOF
+ rm -f conftest.$ac_objext
+ if { (eval echo "$as_me:$LINENO: \"$ac_compile\"") >&5
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