Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv11845
Modified Files: emboss.info emboss.patch Log Message: upstream fixes, including one for a crash on intel Macs Index: emboss.patch =================================================================== RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/emboss.patch,v retrieving revision 1.2 retrieving revision 1.3 diff -u -d -r1.2 -r1.3 --- emboss.patch 20 Feb 2006 23:07:11 -0000 1.2 +++ emboss.patch 4 Apr 2006 21:33:47 -0000 1.3 @@ -1,20 +1,78 @@ -diff -Naur EMBOSS-3.0.0/ajax/Makefile.in EMBOSS-3.0.0-patched/ajax/Makefile.in ---- EMBOSS-3.0.0/ajax/Makefile.in 2005-07-15 06:59:14.000000000 -0400 -+++ EMBOSS-3.0.0-patched/ajax/Makefile.in 2006-02-02 20:40:23.000000000 -0500 -@@ -86,7 +86,8 @@ - libajax_la_OBJECTS = $(am_libajax_la_OBJECTS) - @[EMAIL PROTECTED] = -rpath $(libdir) - @[EMAIL PROTECTED] = -rpath $(libdir) --libajaxg_la_LIBADD = -+libajaxg_la_LIBADD = libajax.la ../plplot/libplplot.la -+libajaxg_la_DEPENDENCIES = libajax.la ../plplot/libplplot.la - am__libajaxg_la_SOURCES_DIST = ajgraph.c ajhist.c [...6294 lines suppressed...] + typedef struct EmbSBtreeEntry + { + AjBool do_id; +@@ -48,10 +118,16 @@ + + ajint idorder; + ajint idfill; ++ ajint idsecorder; ++ ajint idsecfill; + ajint acorder; + ajint acfill; ++ ajint acsecorder; ++ ajint acsecfill; + ajint svorder; + ajint svfill; ++ ajint svsecorder; ++ ajint svsecfill; + + ajint kworder; + ajint kwfill; Index: emboss.info =================================================================== RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/emboss.info,v retrieving revision 1.3 retrieving revision 1.4 diff -u -d -r1.3 -r1.4 --- emboss.info 21 Feb 2006 01:42:13 -0000 1.3 +++ emboss.info 4 Apr 2006 21:33:46 -0000 1.4 @@ -1,6 +1,6 @@ Package: emboss Version: 3.0.0 -Revision: 101 +Revision: 102 Depends: %N-ajax3-shlibs (>= %v-%r), %N-nucleus3-shlibs (>= %v-%r), %N-plplot5-shlibs (>= %v-%r), x11, libpng3-shlibs, libjpeg-shlibs, gd2-shlibs, system-java14 BuildDepends: libpng3, libjpeg, gd2, libiconv-dev, x11-dev, system-java14-dev #Replaces: emboss (<< 2.7.1-2) @@ -9,6 +9,7 @@ Primary: ftp://emboss.open-bio.org/pub/EMBOSS/ << Source-MD5: fa72feded9ab9272e3e731c09f545dcc +SetCPPFLAGS: -Dstat64=stat Patch: %n.patch PatchScript: << perl -pi -e 's,([<"])(pcre)(.*.h[>"]),\1EMBOSS/\2\3,' ajax/* ------------------------------------------------------- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnk&kid=110944&bid=241720&dat=121642 _______________________________________________ Fink-commits mailing list Fink-commits@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-commits