Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory sc8-pr-cvs5.sourceforge.net:/tmp/cvs-serv22221/main/finkinfo/sci
Modified Files:
Tag: pangocairo-branch
cadabra.info dx.info geda-gnetlist.info mizar-gab-html.info
mizar-gab.info mizar-semantic-mml.info mizar.info netcdf.info
octave-forge.info prover9.info pygsl-py.info
Added Files:
Tag: pangocairo-branch
dx-hdf5.info dx-hdf5.patch glpk-java.info glpk-java.patch
netcdf-g95.info netcdf-gfortran.info netcdf.patch
Log Message:
merge from head
Index: mizar-semantic-mml.info
===================================================================
RCS file:
/cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/mizar-semantic-mml.info,v
retrieving revision 1.2.2.3
retrieving revision 1.2.2.4
diff -u -d -r1.2.2.3 -r1.2.2.4
--- mizar-semantic-mml.info 23 Jan 2007 18:39:48 -0000 1.2.2.3
+++ mizar-semantic-mml.info 30 Apr 2007 02:48:27 -0000 1.2.2.4
@@ -1,13 +1,13 @@
Package: mizar-semantic-mml
Description: Semantic HTML presentation of the MML
-Version: 4.76.959
+Version: 4.81.962
Revision: 1
Replaces: mizar-semantic-mml (<= 4.66.942)
License: Commercial
Homepage: http://mmlquery.mizar.org
Source: http://lipa.ms.mff.cuni.cz/~urban/xmlmml/html_abstr.%v.tar.gz
-Source-MD5: 6901f4a96835f14acd32cf5a275a5880
-SourceDirectory: html_abstr.%v
+Source-MD5: 4cb505e2b53bfde61cf8168640702e9a
+SourceDirectory: html
CompileScript: <<
<<
InstallScript: <<
@@ -22,5 +22,3 @@
<<
Maintainer: Jesse Alama <[EMAIL PROTECTED]>
-
-
Index: prover9.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/prover9.info,v
retrieving revision 1.2.2.2
retrieving revision 1.2.2.3
diff -u -d -r1.2.2.2 -r1.2.2.3
--- prover9.info 16 Jan 2007 16:03:13 -0000 1.2.2.2
+++ prover9.info 30 Apr 2007 02:48:28 -0000 1.2.2.3
@@ -1,22 +1,21 @@
Package: prover9
Description: Prove theorems and build models
-Version: 2006-11
+Version: 2007-03
Revision: 1
License: OSI-Approved
-Source:
http://www.cs.unm.edu/~mccune/prover9/download/LADR-November-2006.tar.gz
-Source-MD5: 7940527b679ce38a19db2e39fcd26b21
-SourceDirectory: LADR-November-2006
-Source2: http://www.cs.unm.edu/~mccune/prover9/manual/%n-manual-1106.tar.gz
-Source2-MD5: d4e7805330aaa5b44ba41edc7b9ea130
-Source2ExtractDir: LADR-November-2006
-DocFiles: November-2006/*.html
+Source: http://www.cs.unm.edu/~mccune/prover9/download/LADR-March-2007.tar.gz
+Source-MD5: 4e439104533828beb1a331edcb1f23af
+SourceDirectory: LADR-March-2007
+Source2: http://www.cs.unm.edu/~mccune/prover9/manual/%n-manual-0307.tar.gz
+Source2-MD5: e3fcbdc0fec28c2992072c8b9349e138
+Source2ExtractDir: LADR-March-2007
+DocFiles: %n-manual-0307/*.html
CompileScript: <<
make all
<<
InstallScript: <<
mkdir -p %i/bin
- install -m 755 bin/attack2 %i/bin
- install -m 755 bin/attack3.py %i/bin
+ install -m 755 bin/attack %i/bin
install -m 755 bin/autosketches4 %i/bin
install -m 755 bin/clausefilter %i/bin
install -m 755 bin/clausetester %i/bin
@@ -45,10 +44,5 @@
logic, and Mace4 searches for finite models and
counterexamples. Prover9 is the successor of the Otter prover.
<<
-DescPackaging: <<
-Author has given permission for the package to be distributed by Fink, and
hasn't
-descided upon an established licensure (e.g. GPL) as of yet.
-<<
Homepage: http://www.cs.unm.edu/~mccune/prover9
-Maintainer: Jesse Alama <[EMAIL PROTECTED]>
-
+Maintainer: Jesse Alama <[EMAIL PROTECTED]>
\ No newline at end of file
--- NEW FILE: glpk-java.patch ---
diff -urN source.orig/LICENSE source/LICENSE
--- source.orig/LICENSE 1969-12-31 16:00:00.000000000 -0800
+++ source/LICENSE 2006-06-15 15:01:02.000000000 -0700
@@ -0,0 +1,339 @@
+ GNU GENERAL PUBLIC LICENSE
+ Version 2, June 1991
+
+ Copyright (C) 1989, 1991 Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
+ Everyone is permitted to copy and distribute verbatim copies
+ of this license document, but changing it is not allowed.
+
+ Preamble
+
+ The licenses for most software are designed to take away your
+freedom to share and change it. By contrast, the GNU General Public
+License is intended to guarantee your freedom to share and change free
+software--to make sure the software is free for all its users. This
+General Public License applies to most of the Free Software
+Foundation's software and to any other program whose authors commit to
+using it. (Some other Free Software Foundation software is covered by
+the GNU Lesser General Public License instead.) You can apply it to
+your programs, too.
+
+ When we speak of free software, we are referring to freedom, not
+price. Our General Public Licenses are designed to make sure that you
+have the freedom to distribute copies of free software (and charge for
+this service if you wish), that you receive source code or can get it
+if you want it, that you can change the software or use pieces of it
+in new free programs; and that you know you can do these things.
+
+ To protect your rights, we need to make restrictions that forbid
+anyone to deny you these rights or to ask you to surrender the rights.
+These restrictions translate to certain responsibilities for you if you
+distribute copies of the software, or if you modify it.
+
+ For example, if you distribute copies of such a program, whether
+gratis or for a fee, you must give the recipients all the rights that
+you have. You must make sure that they, too, receive or can get the
+source code. And you must show them these terms so they know their
+rights.
+
+ We protect your rights with two steps: (1) copyright the software, and
+(2) offer you this license which gives you legal permission to copy,
+distribute and/or modify the software.
+
+ Also, for each author's protection and ours, we want to make certain
+that everyone understands that there is no warranty for this free
+software. If the software is modified by someone else and passed on, we
+want its recipients to know that what they have is not the original, so
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+ Finally, any free program is threatened constantly by software
+patents. We wish to avoid the danger that redistributors of a free
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+ The precise terms and conditions for copying, distribution and
+modification follow.
+
+ GNU GENERAL PUBLIC LICENSE
+ TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
+
+ 0. This License applies to any program or other work which contains
+a notice placed by the copyright holder saying it may be distributed
+under the terms of this General Public License. The "Program", below,
+refers to any such program or work, and a "work based on the Program"
+means either the Program or any derivative work under copyright law:
+that is to say, a work containing the Program or a portion of it,
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+the term "modification".) Each licensee is addressed as "you".
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+Activities other than copying, distribution and modification are not
+covered by this License; they are outside its scope. The act of
+running the Program is not restricted, and the output from the Program
+is covered only if its contents constitute a work based on the
+Program (independent of having been made by running the Program).
+Whether that is true depends on what the Program does.
+
+ 1. You may copy and distribute verbatim copies of the Program's
+source code as you receive it, in any medium, provided that you
+conspicuously and appropriately publish on each copy an appropriate
+copyright notice and disclaimer of warranty; keep intact all the
+notices that refer to this License and to the absence of any warranty;
+and give any other recipients of the Program a copy of this License
+along with the Program.
+
+You may charge a fee for the physical act of transferring a copy, and
+you may at your option offer warranty protection in exchange for a fee.
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+ 2. You may modify your copy or copies of the Program or any portion
+of it, thus forming a work based on the Program, and copy and
+distribute such modifications or work under the terms of Section 1
+above, provided that you also meet all of these conditions:
+
+ a) You must cause the modified files to carry prominent notices
+ stating that you changed the files and the date of any change.
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+ b) You must cause any work that you distribute or publish, that in
+ whole or in part contains or is derived from the Program or any
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+ c) If the modified program normally reads commands interactively
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+ announcement including an appropriate copyright notice and a
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+These requirements apply to the modified work as a whole. If
+identifiable sections of that work are not derived from the Program,
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+on the Program, the distribution of the whole must be on the terms of
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+entire whole, and thus to each and every part regardless of who wrote it.
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+
+In addition, mere aggregation of another work not based on the Program
+with the Program (or with a work based on the Program) on a volume of
+a storage or distribution medium does not bring the other work under
+the scope of this License.
+
+ 3. You may copy and distribute the Program (or a work based on it,
+under Section 2) in object code or executable form under the terms of
+Sections 1 and 2 above provided that you also do one of the following:
+
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+ 4. You may not copy, modify, sublicense, or distribute the Program
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+
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+prohibited by law if you do not accept this License. Therefore, by
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+
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+the only way you could satisfy both it and this License would be to
+refrain entirely from distribution of the Program.
+
+If any portion of this section is held invalid or unenforceable under
+any particular circumstance, the balance of the section is intended to
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+circumstances.
+
+It is not the purpose of this section to induce you to infringe any
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+
+This section is intended to make thoroughly clear what is believed to
+be a consequence of the rest of this License.
+
+ 8. If the distribution and/or use of the Program is restricted in
+certain countries either by patents or by copyrighted interfaces, the
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+the limitation as if written in the body of this License.
+
+ 9. The Free Software Foundation may publish revised and/or new versions
+of the General Public License from time to time. Such new versions will
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+address new problems or concerns.
+
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+specifies a version number of this License which applies to it and "any
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+either of that version or of any later version published by the Free
+Software Foundation. If the Program does not specify a version number of
+this License, you may choose any version ever published by the Free Software
+Foundation.
+
+ 10. If you wish to incorporate parts of the Program into other free
+programs whose distribution conditions are different, write to the author
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+make exceptions for this. Our decision will be guided by the two goals
+of preserving the free status of all derivatives of our free software and
+of promoting the sharing and reuse of software generally.
+
+ NO WARRANTY
+
+ 11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY
+FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN
+OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES
+PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED
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+MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS
+TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE
+PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING,
+REPAIR OR CORRECTION.
+
+ 12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
+WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR
+REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES,
+INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING
+OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED
+TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY
+YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER
+PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE
+POSSIBILITY OF SUCH DAMAGES.
+
+ END OF TERMS AND CONDITIONS
+
+ How to Apply These Terms to Your New Programs
+
+ If you develop a new program, and you want it to be of the greatest
+possible use to the public, the best way to achieve this is to make it
+free software which everyone can redistribute and change under these terms.
+
+ To do so, attach the following notices to the program. It is safest
+to attach them to the start of each source file to most effectively
+convey the exclusion of warranty; and each file should have at least
+the "copyright" line and a pointer to where the full notice is found.
+
+ <one line to give the program's name and a brief idea of what it does.>
+ Copyright (C) <year> <name of author>
+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+Also add information on how to contact you by electronic and paper mail.
+
+If the program is interactive, make it output a short notice like this
+when it starts in an interactive mode:
+
+ Gnomovision version 69, Copyright (C) year name of author
+ Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
+ This is free software, and you are welcome to redistribute it
+ under certain conditions; type `show c' for details.
+
+The hypothetical commands `show w' and `show c' should show the appropriate
+parts of the General Public License. Of course, the commands you use may
+be called something other than `show w' and `show c'; they could even be
+mouse-clicks or menu items--whatever suits your program.
+
+You should also get your employer (if you work as a programmer) or your
+school, if any, to sign a "copyright disclaimer" for the program, if
+necessary. Here is a sample; alter the names:
+
+ Yoyodyne, Inc., hereby disclaims all copyright interest in the program
+ `Gnomovision' (which makes passes at compilers) written by James Hacker.
+
+ <signature of Ty Coon>, 1 April 1989
+ Ty Coon, President of Vice
+
+This General Public License does not permit incorporating your program into
+proprietary programs. If your program is a subroutine library, you may
+consider it more useful to permit linking proprietary applications with the
+library. If this is what you want to do, use the GNU Lesser General
+Public License instead of this License.
diff -urN source.orig/c/glpk_jni.c source/c/glpk_jni.c
--- source.orig/c/glpk_jni.c 2005-11-10 20:21:40.000000000 -0800
+++ source/c/glpk_jni.c 2007-04-19 00:09:58.000000000 -0700
@@ -30,11 +30,14 @@
#include <jni.h>
#include <glpk.h>
-#include <malloc.h>
+#include <stdlib.h>
#include "org_gnu_glpk_GlpkSolver.h"
+/* Define undocumented GLPK functions */
+void _glp_lib_print_hook(int (*func)(void *info, char *buf), void *info);
+void _glp_lib_fault_hook(int (*func)(void *info, char *buf), void *info);
/* ***** preparatory functions to communicate between C and Java ***** */
@@ -173,8 +176,8 @@
info->env = env;
info->obj = obj;
- lib_set_fault_hook((void*)info, enable ? NULL : &_fault_hook_fn);
- lib_set_print_hook((void*)info, enable ? NULL : &_print_hook_fn);
+ _glp_lib_fault_hook(enable ? NULL : &_fault_hook_fn, (void*)info);
+ _glp_lib_print_hook(enable ? NULL : &_print_hook_fn, (void*)info);
}
Index: netcdf.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/netcdf.info,v
retrieving revision 1.3.2.3
retrieving revision 1.3.2.4
diff -u -d -r1.3.2.3 -r1.3.2.4
--- netcdf.info 4 Feb 2007 15:37:20 -0000 1.3.2.3
+++ netcdf.info 30 Apr 2007 02:48:28 -0000 1.3.2.4
@@ -1,70 +1,79 @@
Package: netcdf
-Version: 3.6.1
-Revision: 1003
+Version: 3.6.2
+Revision: 6
BuildDependsOnly: True
Maintainer: Jeffrey Whitaker <[EMAIL PROTECTED]>
-Depends: %N-shlibs (= %v-%r) | netcdf-absoft-shlibs (>= 3.5.1-3), %N-bin |
netcdf-absoft-bin
-BuildDepends: g95 (>= 0.50-20060321)
-Conflicts: netcdf-absoft
-Replaces: netcdf-absoft
-GCC: 4.0
-Source: ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-%v.tar.gz
-SourceDirectory: %N-%v/src
-Source-MD5: 07a9db424337c5e4833fb84136e09a1e
-NoSetMAKEFLAGS: true
-SetMAKEFLAGS: -j1
-NoSetLDFLAGS: true
-SetCPPFLAGS: -DNDEBUG -Df2cFortran
-CompileScript: <<
- #!/bin/sh -ev
- CXX="g++" CC="gcc" CXXFLAGS="-O2" CFLAGS='-O2' FC='%p/bin/g95' FFLAGS='-O2'
F90='%p/bin/g95' ./configure --prefix=%p/%n
- make
- #make check
+Depends: %n-shlibs (= %v-%r), %n-bin (= %v-%r)
+Conflicts: %n-absoft
+Replaces: %n-absoft
+Source: ftp://ftp.unidata.ucar.edu/pub/%n/%n-%v.tar.gz
+Source-MD5: a7d450da9081e4a6e440705ea31868d3
+SourceDirectory: %n-%v
+NoSetCPPFlags: true
+Patch: %n.patch
+ConfigureParams: <<
+ --enable-shared CFLAGS=-O2 CXXFLAGS=-O2 \
+ --mandir='${prefix}/share/man' --enable-docs-install
--docdir='${prefix}/share/doc/%n' \
+ --disable-dependency-tracking --disable-fortran-compiler-check --disable-f77
--disable-f90
<<
InstallScript: <<
- #!/bin/sh -ev
- mkdir -p %i/share/man
- make install prefix=%i MANDIR=%i/share/man
- gcclib=`%p/bin/g95 --print-lib`
- FLIBDIR=`dirname $gcclib`
- (mkdir libtmp; cd libtmp; ar -x ../libsrc/libnetcdf.a) || exit 1
- (mkdir libtmp2; cd libtmp2; ar -x ../cxx/libnetcdf_c++.a) || exit 1
- (cd libtmp; objfiles=`ls -1 *.o`; cc -dynamiclib -single_module -o
libnetcdf.%v.dylib $objfiles -L$FLIBDIR -lf95 -install_name
%p/lib/libnetcdf.3.dylib -current_version %v -compatibility_version 3.5; cp
libnetcdf.%v.dylib %i/lib) || exit 1
- (cd %i/lib; ln -s %p/lib/libnetcdf.%v.dylib libnetcdf.3.dylib; ln -s
%p/lib/libnetcdf.3.dylib libnetcdf.dylib; ln -s %p/lib/libnetcdf.%v.dylib
libnetcdf.3.5.0.dylib) || exit 1
- (cd libtmp2; objfiles=`ls -1 *.o`; c++ -dynamiclib -flat_namespace -undefined
suppress -o libnetcdf_c++.%v.dylib $objfiles -install_name
%p/lib/libnetcdf_c++.3.dylib -current_version %v -compatibility_version 3.5; cp
libnetcdf_c++.%v.dylib %i/lib) || exit 1
- (cd %i/lib; ln -s %p/lib/libnetcdf_c++.%v.dylib libnetcdf_c++.3.dylib; ln -s
%p/lib/libnetcdf_c++.3.dylib libnetcdf_c++.dylib) || exit 1
- rm -rf %i/share/man/man3f
- rm -rf %i/share/man/cat1
- rm -rf %i/share/man/cat3
- rm -f %i/share/man/whatis.db
+ #!/bin/sh -ev
+ make prefix=%i install
+ # Add C, CDL and CXX examples
+ mkdir -p %i/share/doc/%N/examples
+ cp -r examples/C* %i/share/doc/%N/examples
+ # Remove duplicate and Fortran documentation
+ rm -f %i/share/doc/%N/*.{ps,txt,info}
+ rm -f %i/share/info/netcdf-f*.info
+ # For backward compatability of old shlibs
+ cd %i/lib
+ ln -s libnetcdf.{4,3}.dylib
+ ln -s libnetcdf_c++.{4,3}.dylib
<<
SplitOff: <<
- Package: %N-shlibs
- Shlibs: <<
- %p/lib/libnetcdf.3.5.0.dylib 3.5.0 %n (>= 3.5.1-14) | netcdf-absoft-shlibs
(>= 3.5.1-3)
- %p/lib/libnetcdf.3.dylib 3.5.0 %n (>= 3.5.1-14) | netcdf-absoft-shlibs (>=
3.5.1-3)
- %p/lib/libnetcdf_c++.3.dylib 3.5.0 %n (>= 3.5.1-14) | netcdf-absoft-shlibs
(>= 3.5.1-3)
- <<
- Conflicts: netcdf-absoft-shlibs
- Replaces: %N (<= 3.5.0-6), netcdf-absoft-shlibs, netcdf-absoft (<= 3.5.1-2)
- Files: lib/libnetcdf*.*.dylib
- DocFiles: COPYRIGHT README RELEASE_NOTES
+ Package: %N-shlibs
+ Conflicts: %N-absoft-shlibs
+ Replaces: %N-absoft-shlibs, %N (<= 3.5.0-6), %N-absoft (<= 3.5.1-2)
+ Suggests: %N-bin
+ Files: lib/libnetcdf.*.dylib lib/libnetcdf_c++.*.dylib
+ Shlibs: <<
+ %p/lib/libnetcdf.4.dylib 5.0.0 %n (>= 3.6.2-1)
+ %p/lib/libnetcdf_c++.4.dylib 5.0.0 %n (>= 3.6.2-1)
+ <<
+ DocFiles: COPYRIGHT README RELEASE_NOTES
<<
SplitOff2: <<
Package: %N-bin
- Conflicts: netcdf-absoft-bin
- Replaces: %N (<= 3.5.0-6), netcdf-absoft-bin, netcdf-absoft (<= 3.5.1-2)
- Files: bin
+ Depends: %N-shlibs (= %v-%r)
+ Conflicts: %N-absoft-bin
+ Replaces: %N-absoft-bin, %N (<= 3.5.0-6), %N-absoft (<= 3.5.1-2)
+ Files: bin share/man/man1 share/doc/%N/*-man-1.html
DocFiles: COPYRIGHT README RELEASE_NOTES
<<
DocFiles: COPYRIGHT README RELEASE_NOTES
+InfoDocs: netcdf-install.info netcdf-tutorial.info netcdf.info netcdf-c.info
netcdf-cxx.info
Description: Interface & lib for array-based data access
DescDetail: <<
-The NetCDF (network Common Data Form) library defines a machine-independent
+The netCDF (network Common Data Form) library defines a machine-independent
format for representing scientific data. Together, the interface, library,
and format support the creation, access, and sharing of scientific data.
-Uses g95 to build fortran77 and fortran95 interface.
+This package provides libraries, documentation and examples for interfacing
+with C and C++ code. For libraries, documentation and examples for interfacing
+with Fortran 77 (and Fortran 90) code install package,
+`%N-g95', or `%N-gfortran'.
<<
-Homepage: http://www.unidata.ucar.edu/packages/netcdf/
+DescPackaging: <<
+The Fortran interface is moved to a different package so that users
+do not have to install a Fortran compiler to just get the C/C++ interface.
+<<
+DescPort: <<
+CFLAGS=-O2 CXXFLAGS=-O2 is essential to avoid debugging mode flags (-g).
+Included examples in documents directory.
+Removed non-essential duplicate documentation (.ps and .txt).
+Added links to new shlibs for backwards compatibility. This works for the C
+interface only, not for the Fortran interface. But since Fink did not have
+any dependencies on the Fortran interface, there is no reason to create
netcdf4.
+<<
+Homepage: http://www.unidata.ucar.edu/software/netcdf/
License: OSI-Approved
Index: mizar-gab.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/mizar-gab.info,v
retrieving revision 1.1.2.3
retrieving revision 1.1.2.4
diff -u -d -r1.1.2.3 -r1.1.2.4
--- mizar-gab.info 13 Feb 2007 19:58:11 -0000 1.1.2.3
+++ mizar-gab.info 30 Apr 2007 02:48:27 -0000 1.1.2.4
@@ -1,11 +1,11 @@
Package: mizar-gab
Description: Generated ABstracts for articles in the MML
-Version: 4.76.959
+Version: 4.81.962
Revision: 1
License: Commercial
Recommends: mizar, mizar-gab-html
Source: http://merak.pb.bialystok.pl/mmlquery/downloads/gab-%v.tgz
-Source-MD5: e78a0c6d1ca10d9d2956ef5b1c8c8e3a
+Source-MD5: a8f6ed9a1a5eda9e93a337982070002c
SourceDirectory: %v
CompileScript: <<
<<
@@ -24,5 +24,3 @@
<<
Homepage: http://merak.pb.bialystok.pl
Maintainer: Jesse Alama <[EMAIL PROTECTED]>
-
-
Index: geda-gnetlist.info
===================================================================
RCS file:
/cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/geda-gnetlist.info,v
retrieving revision 1.8.2.15
retrieving revision 1.8.2.16
diff -u -d -r1.8.2.15 -r1.8.2.16
--- geda-gnetlist.info 20 Apr 2007 16:25:29 -0000 1.8.2.15
+++ geda-gnetlist.info 30 Apr 2007 02:48:27 -0000 1.8.2.16
@@ -9,10 +9,10 @@
gtk+2 (>= 2.10.0-1), atk1-shlibs (>= 1.17.0-1), pango1-xft2-ft219 (>=
1.16.0-1)
<<
BuildDepends: <<
- glitz, expat1, libjpeg, libpng3, cairo (>= 1.2-1), fontconfig2-dev (>=
2.3.2-13), freetype219 (>= 2.3.1-1), xft2-dev, gd2,
+ glitz, expat1, libpng3, cairo (>= 1.2-1), fontconfig2-dev (>= 2.3.2-13),
freetype219 (>= 2.3.1-1), xft2-dev, gd2,
guile16-dev (>= 1.6.7-1010), libgeda (>= %v-0), geda-symbols,
x11-dev, pkgconfig (>= 0.21-1), libiconv-dev, libgettext3-dev,
- glib2-dev (>= 2.12.0-1), gtk+2-dev (>= 2.10.0-1), atk1 (>= 1.17.0-1),
pango1-xft2-ft219-dev (>= 1.16.0-1)
+ glib2-dev (>= 2.12.0-1), gtk+2-dev (>= 2.10.0-1), atk1 (>= 1.17.0-1),
pango1-xft2-ft219-dev (>= 1.16.0-1), libjpeg
<<
CustomMirror: <<
Index: cadabra.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/cadabra.info,v
retrieving revision 1.1.2.3
retrieving revision 1.1.2.4
diff -u -d -r1.1.2.3 -r1.1.2.4
--- cadabra.info 15 Mar 2007 00:58:46 -0000 1.1.2.3
+++ cadabra.info 30 Apr 2007 02:48:27 -0000 1.1.2.4
@@ -1,5 +1,5 @@
Package: cadabra
-Version: 0.102
+Version: 0.111
Revision: 1
Description: Computer algebra system for field theory
License: GPL
@@ -13,13 +13,13 @@
glibmm2.4, breqn, applesystemfonts, gnome-icon-theme
<<
BuildDepends: <<
- modglue, gtk+2-dev, x11-dev, pcre, gmp, libsigc++2, glib2-dev,
+ modglue (>= 1.8-1), gtk+2-dev, x11-dev, pcre, gmp, libsigc++2, glib2-dev,
pango1-xft2-dev, atk1, glibmm2.4-dev, gtkmm2.4-dev
<<
# Unpack Phase:
Source: http://www.aei.mpg.de/~peekas/cadabra/cadabra-%v.tar.gz
-Source-MD5: 9c22dfc8e2d9cd925af2ebc5d8ac053e
+Source-MD5: f3ff6339d22634340b4a9c60278184c1
# Compile Phase:
# GCC: 4.0
@@ -28,8 +28,8 @@
# Install Phase:
DocFiles: AUTHORS ChangeLog history COPYING
InstallScript: <<
- # make test
- # make advtest
+# make test
+# make advtest
make -j1 install DESTDIR=%d DEVDESTDIR=%d
rm -fr %i/share/TeXmacs
mkdir -p %i/share/doc/%n/examples
--- NEW FILE: netcdf-g95.info ---
Package: netcdf-g95
Version: 3.6.2
Revision: 6
BuildDepends: g95
BuildDependsOnly: True
Maintainer: Jeffrey Whitaker <[EMAIL PROTECTED]>
Depends: %n-shlibs (= %v-%r)
Conflicts: netcdf (<= 3.6.1-1003), netcdf-absoft
Replaces: netcdf (<= 3.6.1-1003), netcdf-absoft, netcdf-gfortran
Source: ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-%v.tar.gz
Source-MD5: a7d450da9081e4a6e440705ea31868d3
SourceDirectory: netcdf-%v
NoSetCPPFlags: true
Patch: netcdf.patch
ConfigureParams: <<
--prefix=%p/lib/netcdf-g95 \
--enable-shared CFLAGS=-O2 FFLAGS=-O2 FCFLAGS=-O2 FC=g95 F77=g95 F90=g95 \
--mandir='${prefix}/share/man' --enable-docs-install
--docdir='${prefix}/share/doc/netcdf' \
--disable-dependency-tracking --disable-fortran-compiler-check --disable-c
--with-netcdf-c-lib=%p/lib \
--disable-cxx --disable-utilities
<<
InstallScript: <<
#!/bin/sh -ev
make install prefix=%i/lib/netcdf-g95
mkdir -p %i/share
mv %i/lib/netcdf-g95/share/man %i/share
mv %i/lib/netcdf-g95/share/doc %i/share
mv %i/lib/netcdf-g95/share/info %i/share
/bin/rm -rf %i/lib/netcdf-g95/share
# Add examples for F77 and F90
mkdir -p %i/share/doc/netcdf/examples
cp -r examples/F* %i/share/doc/netcdf/examples
# Remove duplicate and C and CXX documentation
rm -f %i/share/doc/netcdf/*.{ps,txt,info}
rm -f %i/share/doc/netcdf/netcdf{-*,}.*
rm -f %i/share/info/netcdf{-[a-eg-z]*,}.info
<<
SplitOff: <<
Package: %N-shlibs
Depends: netcdf-shlibs (= %v-%r)
Files: lib/netcdf-g95/lib/libnetcdff.*.dylib
Shlibs: %p/lib/netcdf-g95/lib/libnetcdff.4.dylib 5.0.0 %n (>= 3.6.2-1001)
DocFiles: COPYRIGHT README RELEASE_NOTES
<<
InfoDocs: netcdf-f77.info netcdf-f90.info
DocFiles: COPYRIGHT README RELEASE_NOTES
Description: Interface & lib for array-based data access
DescDetail: <<
The netCDF (network Common Data Form) library defines a machine-independent
format for representing scientific data. Together, the interface, library,
and format support the creation, access, and sharing of scientific data.
This package provides libraries, documentation and examples for interfacing
with Fortran 77 and Fortran 90 code using the g95 compiler.
Installs library and include files in %p/lib/netcdf-g95 to avoid
conflicting with the netcdf-gfortran package.
<<
DescPackaging: <<
This Fortran interface is created as a different package so that users
do not have to install a Fortran compiler to just get the C/C++ interface.
<<
DescPort: <<
CFLAGS=-O2 FFLAGS=-O2 FCFLAGS=-O2 is essential to avoid debugging mode flags
(-g).
All docs are moved into the directory /sw/share/doc/netcdf.
Removed non-essential duplicate documentation (.ps and .txt).
<<
Homepage: http://www.unidata.ucar.edu/software/netcdf/
License: OSI-Approved
--- NEW FILE: netcdf-gfortran.info ---
Package: netcdf-gfortran
Version: 3.6.2
Revision: 6
BuildDepends: gcc42
BuildDependsOnly: True
Maintainer: Jeffrey Whitaker <[EMAIL PROTECTED]>
Depends: %n-shlibs (= %v-%r)
Conflicts: netcdf (<= 3.6.1-1003), netcdf-absoft
Replaces: netcdf (<= 3.6.1-1003), netcdf-absoft, netcdf-g95
Source: ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-%v.tar.gz
Source-MD5: a7d450da9081e4a6e440705ea31868d3
SourceDirectory: netcdf-%v
NoSetCPPFlags: true
Patch: netcdf.patch
PatchScript: <<
perl -pi.bak -e 's|\$rpath|%p/lib/netcdf-gfortran|g' **/configure
<<
ConfigureParams: <<
--prefix=%i/lib/netcdf-gfortran \
--enable-shared CFLAGS=-O2 FFLAGS=-O2 FCFLAGS=-O2 FC=gfortran F77=gfortran
F90=gfortran \
--mandir='${prefix}/share/man' --enable-docs-install
--docdir='${prefix}/share/doc/netcdf' \
--disable-dependency-tracking --disable-fortran-compiler-check --disable-c
--with-netcdf-c-lib=%p/lib \
--disable-cxx --disable-utilities
<<
InstallScript: <<
#!/bin/sh -ev
make install prefix=%i/lib/netcdf-gfortran
#make install DESTDIR=%d/lib/netcdf-gfortran
mkdir -p %i/share
mv %i/lib/netcdf-gfortran/share/man %i/share
mv %i/lib/netcdf-gfortran/share/doc %i/share
mv %i/lib/netcdf-gfortran/share/info %i/share
/bin/rm -rf %i/lib/netcdf-gfortran/share
# Add examples for F77 and F90
mkdir -p %i/share/doc/netcdf/examples
cp -r examples/F* %i/share/doc/netcdf/examples
# Remove duplicate and C and CXX documentation
rm -f %i/share/doc/netcdf/*.{ps,txt,info}
rm -f %i/share/doc/netcdf/netcdf{-*,}.*
rm -f %i/share/info/netcdf{-[a-eg-z]*,}.info
<<
SplitOff: <<
Package: %N-shlibs
Depends: netcdf-shlibs (= %v-%r), gcc42-shlibs
Files: lib/netcdf-gfortran/lib/libnetcdff.*.dylib
Shlibs: %p/lib/netcdf-gfortran/lib/libnetcdff.4.dylib 5.0.0 %n (>= 3.6.2-1001)
DocFiles: COPYRIGHT README RELEASE_NOTES
<<
InfoDocs: netcdf-f77.info netcdf-f90.info
DocFiles: COPYRIGHT README RELEASE_NOTES
Description: Interface & lib for array-based data access
DescDetail: <<
The netCDF (network Common Data Form) library defines a machine-independent
format for representing scientific data. Together, the interface, library,
and format support the creation, access, and sharing of scientific data.
This package provides libraries, documentation and examples for interfacing
with Fortran 77 and Fortran 90 code using the gfortran compiler.
Installs library and include files in %p/lib/netcdf-g95 to avoid
conflicting with the netcdf-g95 package.
<<
DescPackaging: <<
This Fortran interface is created as a different package so that users
do not have to install a Fortran compiler to just get the C/C++ interface.
<<
DescPort: <<
CFLAGS=-O2 FFLAGS=-O2 FCFLAGS=-O2 is essential to avoid debugging mode flags
(-g).
All docs are moved into the directory /sw/share/doc/netcdf.
Removed non-essential duplicate documentation (.ps and .txt).
<<
Homepage: http://www.unidata.ucar.edu/software/netcdf/
License: OSI-Approved
--- NEW FILE: dx-hdf5.patch ---
diff -urN dxhdf5-0.4.5/Makefile.in dxhdf5-new/Makefile.in
--- dxhdf5-0.4.5/Makefile.in 2006-12-08 05:49:14.000000000 -0500
+++ dxhdf5-new/Makefile.in 2007-04-16 17:03:02.000000000 -0400
@@ -629,7 +629,7 @@
@echo "In order to use OpenDX with all loadable modules,"
@echo "also the ones installed before installing dxhdf5,"
@echo "use this command:"
- @echo "dx -mdf $(prefix)/[EMAIL PROTECTED]@/all.mdf"
+ @echo "dx -mdf $(prefix)/share/dx/[EMAIL PROTECTED]@/all.mdf"
@echo ""
@echo "It may useful to set this up as an alias."
@echo ""
diff -urN dxhdf5-0.4.5/docs/ImportHDF5Field.html.in
dxhdf5-new/docs/ImportHDF5Field.html.in
--- dxhdf5-0.4.5/docs/ImportHDF5Field.html.in 2004-11-19 03:06:26.000000000
-0500
+++ dxhdf5-new/docs/ImportHDF5Field.html.in 2007-04-16 17:03:02.000000000
-0400
@@ -339,7 +339,7 @@
<P>After the module is installed, this example is available
as an OpenDX program in the file:
- <pre>@prefix@/samples/moduleTryOut/ImportHDF5FieldUsage.net</pre>
+
<pre>@prefix@/share/dx/samples/moduleTryOut/ImportHDF5FieldUsage.net</pre>
<P>In the example the file ImportHDF5FieldUsage.h5 is used
which was generated by VORPAL
diff -urN dxhdf5-0.4.5/docs/ImportHDF5Species.html.in
dxhdf5-new/docs/ImportHDF5Species.html.in
--- dxhdf5-0.4.5/docs/ImportHDF5Species.html.in 2004-12-13 05:06:05.000000000
-0500
+++ dxhdf5-new/docs/ImportHDF5Species.html.in 2007-04-16 17:03:02.000000000
-0400
@@ -549,7 +549,7 @@
<P>After the module is installed, this example is available
as an OpenDX program in the file:
- <PRE>@prefix@/samples/moduleTryOut/ImportHDF5SpeciesUsage.net</PRE>
+
<PRE>@prefix@/share/dx/samples/moduleTryOut/ImportHDF5SpeciesUsage.net</PRE>
<P>In the example the file ImportHDF5SpeciesUsage.h5 is used,
which was generated by VORPAL
diff -urN dxhdf5-0.4.5/docs/Makefile.in dxhdf5-new/docs/Makefile.in
--- dxhdf5-0.4.5/docs/Makefile.in 2006-12-08 05:49:14.000000000 -0500
+++ dxhdf5-new/docs/Makefile.in 2007-04-16 17:03:02.000000000 -0400
@@ -145,7 +145,7 @@
build_cpu = @build_cpu@
build_os = @build_os@
build_vendor = @build_vendor@
-datadir = $(prefix)/html/modules
+datadir = @prefix@/share/dx/html/modules
exec_prefix = @exec_prefix@
host = @host@
host_alias = @host_alias@
diff -urN dxhdf5-0.4.5/modules/Makefile.in dxhdf5-new/modules/Makefile.in
--- dxhdf5-0.4.5/modules/Makefile.in 2006-12-08 05:49:15.000000000 -0500
+++ dxhdf5-new/modules/Makefile.in 2007-04-16 17:03:02.000000000 -0400
@@ -192,7 +192,7 @@
target_alias = @target_alias@
# installation directories
-modulesdir = $(prefix)/[EMAIL PROTECTED]@
+modulesdir = $(prefix)/share/dx/[EMAIL PROTECTED]@
# to be installed
bin_SCRIPTS = dxhdf5
@@ -550,8 +550,8 @@
# for producing the all.mdf file
all.mdf: dxhdf5.mdf
- @if test -d "$(prefix)/[EMAIL PROTECTED]@"; then
\
- MODULES=`cd $(prefix)/[EMAIL PROTECTED]@;
\
+ @if test -d "$(prefix)/share/dx/[EMAIL PROTECTED]@"; then
\
+ MODULES=`cd $(prefix)/share/dx/[EMAIL PROTECTED]@;
\
ls | grep '\.mdf$$'`; \
else \
MODULES=""; \
@@ -561,8 +561,8 @@
\
for i in $$MODULES; do \
if test "$$i" != "all.mdf" -a "$$i" != "dxhdf5.mdf"; then \
- echo "Adding $(prefix)/[EMAIL PROTECTED]@/$$i to all.mdf";
\
- cat $(prefix)/[EMAIL PROTECTED]@/$$i >> ./all.mdf;
\
+ echo "Adding $(prefix)/share/dx/[EMAIL PROTECTED]@/$$i to
all.mdf"; \
+ cat $(prefix)/share/dx/[EMAIL PROTECTED]@/$$i >> ./all.mdf;
\
echo "" >> ./all.mdf; \
fi; \
done; \
diff -urN dxhdf5-0.4.5/modules/dxhdf5.in dxhdf5-new/modules/dxhdf5.in
--- dxhdf5-0.4.5/modules/dxhdf5.in 2006-11-12 03:44:02.000000000 -0500
+++ dxhdf5-new/modules/dxhdf5.in 2007-04-16 17:03:02.000000000 -0400
@@ -5,4 +5,4 @@
dxargs="$@"
[EMAIL PROTECTED]@ -mdf @prefix@/[EMAIL PROTECTED]@/dxhdf5.mdf $dxargs
[EMAIL PROTECTED]@ -mdf @prefix@/share/dx/[EMAIL PROTECTED]@/dxhdf5.mdf $dxargs
diff -urN dxhdf5-0.4.5/modules/dxhdf5.mdf.tmp.in
dxhdf5-new/modules/dxhdf5.mdf.tmp.in
--- dxhdf5-0.4.5/modules/dxhdf5.mdf.tmp.in 2003-10-07 01:17:29.000000000
-0400
+++ dxhdf5-new/modules/dxhdf5.mdf.tmp.in 2007-04-16 17:03:02.000000000
-0400
@@ -1,7 +1,7 @@
MODULE ImportHDF5Field
CATEGORY Import and Export
DESCRIPTION imports a field or a slab of a field from an HDF5 file
-LOADABLE "@prefix@/[EMAIL PROTECTED]@/@dlname@"
+LOADABLE "@DXROOT@/[EMAIL PROTECTED]@/@dlname@"
INPUT filename; string; (none); file name
INPUT fieldname; string; NULL; field name
INPUT lowercorner; integer list; NULL; coordinates the lower corner
@@ -14,7 +14,7 @@
MODULE ImportHDF5Species
CATEGORY Import and Export
DESCRIPTION imports from an HDF5 file particles that meet given conditions
-LOADABLE "@prefix@/[EMAIL PROTECTED]@/@dlname@"
+LOADABLE "@DXROOT@/[EMAIL PROTECTED]@/@dlname@"
INPUT filename; string; (none); file name
INPUT datasetname; string; NULL; dataset name
INPUT x0min[visible:0]; scalar; NULL; minimal value of coordinate in 1st
dimension
diff -urN dxhdf5-0.4.5/samples/Makefile.in dxhdf5-new/samples/Makefile.in
--- dxhdf5-0.4.5/samples/Makefile.in 2006-12-08 05:49:15.000000000 -0500
+++ dxhdf5-new/samples/Makefile.in 2007-04-16 17:03:02.000000000 -0400
@@ -145,7 +145,7 @@
build_cpu = @build_cpu@
build_os = @build_os@
build_vendor = @build_vendor@
-datadir = $(prefix)/samples/moduleTryOut
+datadir = $(prefix)/share/dx/samples/moduleTryOut
exec_prefix = @exec_prefix@
host = @host@
host_alias = @host_alias@
--- NEW FILE: glpk-java.info ---
Package: glpk-java
Version: 4.14
Revision: 2
Type: java(1.4)
Source: http://bjoern.dapnet.de/glpk/source.zip
Source-MD5: 00a0a23e027677f22d9cf141ea52c534
SourceRename: %n-%v.zip
SourceDirectory: source
Depends: glpk (= %v-%r), system-java (>= 1.4)
BuildDepends: system-java-dev (>= 1.4)
Patch: %n.patch
CompileScript: <<
# Java library
cd java && mkdir -p classes && javac -d classes *.java
cd java/classes && jar cf ../%n.jar .
cd java && javah -classpath classes -jni org.gnu.glpk.GlpkSolver
# Javadocs
mkdir -p java/doc/api
cp java/*.java java/doc/api
cd java/doc/api && javadoc *
rm -f java/doc/api/*.java
# JNI library
cd c && gcc -fPIC -fno-common -I $JAVA_HOME/include -I ../java/ -I %p/include/
-idirafter /usr/include/sys -c glpk_jni.c
cd c && gcc -dynamiclib glpk_jni.o -compatibility_version %v -current_version
%v -o libglpk_jni.jnilib -lc -lglpk -L%p/lib
<<
InstallScript: <<
# JNI library
mkdir -p %i/lib
cp c/libglpk_jni.jnilib %i/lib
# Docs
mkdir -p %i/share/doc/%n/api
cp -R java/doc/api/* %i/share/doc/%n/api/
cp LICENSE %i/share/doc/%n/
<<
JarFiles: java/%n.jar
HomePage: http://bjoern.dapnet.de/glpk/index.htm
Maintainer: Trevor Harmon <[EMAIL PROTECTED]>
Description: Java bindings for GLPK
License: GPL
DescDetail: <<
This package provides a Java Native Interface (JNI) for the GNU Linear
Programming Kit (GLPK). It allows GLPK functions to be called from Java.
<<
DescUsage: <<
To run Java programs that use this library, you will need to set the
java.library.path property. For example:
java -Djava.library.path=%p/lib MyGLPKProgram
As an alternative, it is possible to accomplish the same results by setting
the DYLD_LIBRARY_PATH environment variable. For example:
export DYLD_LIBRARY_PATH=%p/lib
However, changing this variable can cause other programs to fail.
<<
Index: mizar-gab-html.info
===================================================================
RCS file:
/cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/mizar-gab-html.info,v
retrieving revision 1.1.2.3
retrieving revision 1.1.2.4
diff -u -d -r1.1.2.3 -r1.1.2.4
--- mizar-gab-html.info 13 Feb 2007 19:58:11 -0000 1.1.2.3
+++ mizar-gab-html.info 30 Apr 2007 02:48:27 -0000 1.1.2.4
@@ -1,11 +1,11 @@
Package: mizar-gab-html
Description: HTML presentation of Generated ABstracts
-Version: 4.76.959
+Version: 4.81.962
Revision: 1
Homepage: http://merak.pb.bialystok.pl
License: Commercial
Source: http://merak.pb.bialystok.pl/mmlquery/downloads/html-%v.tgz
-Source-MD5: e04dddcb8320686233db4efa241a70f2
+Source-MD5: afd148fd436ef68694610f9e07f63c0c
SourceDirectory: %v
Maintainer: Jesse Alama <[EMAIL PROTECTED]>
CompileScript: <<
@@ -22,5 +22,4 @@
For more information on the MML Query tool, which is used to produce
the GAB's, see http://merak.pb.bialystok.pl .
-<<
-
+<<
\ No newline at end of file
Index: octave-forge.info
===================================================================
RCS file:
/cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/octave-forge.info,v
retrieving revision 1.10.2.1
retrieving revision 1.10.2.2
diff -u -d -r1.10.2.1 -r1.10.2.2
--- octave-forge.info 16 Jan 2007 16:03:12 -0000 1.10.2.1
+++ octave-forge.info 30 Apr 2007 02:48:28 -0000 1.10.2.2
@@ -1,9 +1,9 @@
Package: octave-forge
Version: 2006.03.17
-Revision: 1003
+Revision: 1004
Maintainer: Corey Halpin <[EMAIL PROTECTED]>
BuildDepends: <<
- texinfo, g95, libjpeg, fftw3, textutils, gsl, pcre,
+ texinfo, g95, libjpeg, fftw3, gsl, pcre,
hdf5 (>= 1.6.5-1002),
readline5 (>= 5.0-1004), imagemagick-dev
<<
@@ -18,6 +18,7 @@
Source-MD5: d054fa8de6d2494c3efbddaa823da42f
#Patch: %n.patch
UpdateConfigGuess: true
+#SetCPPFLAGS: -no-cpp-precomp
SetLDFLAGS:
SetLIBRARY_PATH: %p/lib
ConfigureParams: <<
Index: pygsl-py.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/pygsl-py.info,v
retrieving revision 1.3
retrieving revision 1.3.2.1
diff -u -d -r1.3 -r1.3.2.1
--- pygsl-py.info 22 Sep 2006 18:27:46 -0000 1.3
+++ pygsl-py.info 30 Apr 2007 02:48:28 -0000 1.3.2.1
@@ -1,17 +1,20 @@
Info2: <<
Package: pygsl-py%type_pkg[python]
-Version: 0.3.2
+Version: 0.9.0
Revision: 1
Type: python(2.3 2.4 2.5)
Description: Python interface for the GNU Scientific Library
License: GPL
Maintainer: Sebastien Maret <[EMAIL PROTECTED]>
-Depends: python%type_pkg[python] | python%type_pkg[python]-nox, gsl-shlibs
(>=1.4), numeric-py%type_pkg[python]
+Depends: <<
+ python%type_pkg[python] | python%type_pkg[python]-nox, gsl-shlibs (>=1.4),
+ numpy-py%type_pkg[python]
+<<
BuildDepends: gsl (>=1.4)
Source: mirror:sourceforge:pygsl/pygsl-%v.tar.gz
-Source-MD5: dde5f5a23dba8e63818dbfadb12e9a09
+Source-MD5: c69c3deed25525f153f2f03942e99040
CompileScript: <<
- python%type_raw[python] setup.py build
+ python%type_raw[python] setup.py build --array-object=numpy
<<
InstallScript: <<
python%type_raw[python] setup.py install --root=%d
--- NEW FILE: netcdf.patch ---
--- netcdf-3.6.2/Makefile.am.orig 2007-02-21 16:25:37.000000000 -0500
+++ netcdf-3.6.2/Makefile.am 2007-03-23 20:45:58.000000000 -0400
@@ -24,6 +24,11 @@
F77_TEST = nf_test
endif
+# Does the user want C API?
+if BUILD_C
+LIBSRC = libsrc
+endif
+
# Does the user want C++ API?
if BUILD_CXX
CXX_DIR = cxx
@@ -57,7 +62,7 @@
# This is the list of subdirs for which Makefiles will be constructed
# and run. ncgen must come before ncdump and cxx, because their tests
# depend on it. nf_test depends upon ncgen as well.
-SUBDIRS = $(F90_DIR) $(F77_DIR) libsrc $(V2_TEST) $(NCGEN) $(NCDUMP) \
+SUBDIRS = $(F90_DIR) $(F77_DIR) $(LIBSRC) $(V2_TEST) $(NCGEN) $(NCDUMP)
\
$(F77_TEST) ${CXX_DIR} nc_test $(MAN) $(EXAMPLES)
# make test should do the same as make check.
--- netcdf-3.6.2/Makefile.in.orig 2007-03-01 17:46:18.000000000 -0500
+++ netcdf-3.6.2/Makefile.in 2007-03-23 20:46:07.000000000 -0400
@@ -263,6 +263,9 @@
@[EMAIL PROTECTED] = fortran
@[EMAIL PROTECTED] = nf_test
+# Does the user want C API?
[EMAIL PROTECTED]@LIBSRC = libsrc
+
# Does the user want C++ API?
@[EMAIL PROTECTED] = cxx
@@ -283,7 +286,7 @@
# This is the list of subdirs for which Makefiles will be constructed
# and run. ncgen must come before ncdump and cxx, because their tests
# depend on it. nf_test depends upon ncgen as well.
-SUBDIRS = $(F90_DIR) $(F77_DIR) libsrc $(V2_TEST) $(NCGEN) $(NCDUMP) \
+SUBDIRS = $(F90_DIR) $(F77_DIR) $(LIBSRC) $(V2_TEST) $(NCGEN) $(NCDUMP)
\
$(F77_TEST) ${CXX_DIR} nc_test $(MAN) $(EXAMPLES)
--- netcdf-3.6.2/f90/netcdf_f90.3.orig 2006-08-14 15:32:52.000000000 -0400
+++ netcdf-3.6.2/f90/netcdf_f90.3 2007-03-23 23:12:15.000000000 -0400
@@ -456,7 +456,7 @@
and the name of the variable.
.RE
.HP
-\fBfunction nf90_Inqire_Variable(\fIncid\fP, \fIvarid\fP, \fIname\fP,
+\fBfunction nf90_inquire_variable(\fIncid\fP, \fIvarid\fP, \fIname\fP,
\fIxtype\fP, \fIndims\fP, \fIdimids\fP, \fInatts\fP)\fR
.RS
.nf
--- netcdf-3.6.2/man/netcdf_f90-man.html.orig 2007-03-01 17:48:13.000000000
-0500
+++ netcdf-3.6.2/man/netcdf_f90-man.html 2007-03-23 23:12:59.000000000
-0400
@@ -713,7 +713,7 @@
<tr valign="top" align="left">
<td width="10%"></td>
<td width="89%">
-<p><b>function nf90_Inqire_Variable(</b><i>ncid</i><b>,</b>
+<p><b>function nf90_inquire_variable(</b><i>ncid</i><b>,</b>
<i>varid</i><b>,</b> <i>name</i><b>,</b>
<i>xtype</i><b>,</b> <i>ndims</i><b>,</b>
<i>dimids</i><b>,</b> <i>natts</i><b>)</b></p></td>
--- netcdf-3.6.2/cxx/Makefile.am.orig 2007-02-27 10:44:33.000000000 -0500
+++ netcdf-3.6.2/cxx/Makefile.am 2007-03-24 15:32:32.000000000 -0400
@@ -68,9 +68,8 @@
else # not USE_NETCDF4
-# Point pre-processor and linker to netcdf-3 directory (libsrc).
+# Point pre-processor to netcdf-3 directory (libsrc).
AM_CPPFLAGS += -I$(top_srcdir)/libsrc
-AM_LDFLAGS = -L. -L$(top_builddir)/libsrc
# Link to the netCDF-3 library and the C++ library.
LDADD = $(top_builddir)/cxx/libnetcdf_c++.la
$(top_builddir)/libsrc/libnetcdf.la
--- netcdf-3.6.2/cxx/Makefile.in.orig 2007-03-01 17:46:14.000000000 -0500
+++ netcdf-3.6.2/cxx/Makefile.in 2007-03-24 15:33:51.000000000 -0400
@@ -318,7 +318,6 @@
tst_failure_SOURCES = tst_failure.cpp
XFAIL_TESTS = tst_failure$(EXEEXT)
TESTS = $(TESTFILES) $(am__append_1) $(am__append_6)
[EMAIL PROTECTED]@AM_LDFLAGS = -L. -L$(top_builddir)/libsrc
@[EMAIL PROTECTED] = -L. -L$(top_builddir)/libsrc4 \
@USE_NETCDF4_TRUE@ $(am__append_4)
Index: mizar.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/mizar.info,v
retrieving revision 1.2.2.3
retrieving revision 1.2.2.4
diff -u -d -r1.2.2.3 -r1.2.2.4
--- mizar.info 13 Feb 2007 19:58:11 -0000 1.2.2.3
+++ mizar.info 30 Apr 2007 02:48:28 -0000 1.2.2.4
@@ -1,6 +1,6 @@
Package: mizar
Depends: mizar-bin, mizar-mml, mizar-doc
-Version: 7.8.03-4.76.959
+Version: 7.8.04-4.81.962
Revision: 2
Description: Build and check first-order formal proofs
Recommends: mizar-semantic-mml, mizar-gab, mizar-mode, mizar-gab-html
@@ -25,8 +25,8 @@
<<
Maintainer: Jesse Alama <[EMAIL PROTECTED]>
Homepage: http://www.mizar.org/
-Source:
ftp://mizar.uwb.edu.pl/pub/system/ppc-darwin/%n-7.8.03_4.76.959-ppc-darwin.tar
-Source-MD5: 48cbb2bef1b01edb7eb490acc233e570
+Source:
ftp://mizar.uwb.edu.pl/pub/system/ppc-darwin/%n-7.8.04_4.81.962-ppc-darwin.tar
+Source-MD5: 0633cb2dbfae2974cc9a3c5c99dfdcc9
NoSourceDirectory: true
DocFiles: README
License: Commercial
@@ -121,5 +121,4 @@
share/doc/mizar/syntax.txt
share/doc/mizar/xml
<<
-<<
-
+<<
\ No newline at end of file
--- NEW FILE: dx-hdf5.info ---
Package: dx-hdf5
Version: 0.4.5
Revision: 1000
Source: http://www-beams.colorado.edu/dxhdf5/download/dxhdf5-%v.tar.gz
Source-MD5: 0946bc46ae70a3848a26899ed7b03da3
Depends: hdf5-shlibs, dx (>=4.3.2-3), szip-shlibs
BuildDepends: hdf5, szip
Patch: %n.patch
GCC:4.0
DocFiles: README AUTHORS NEWS LICENSE
Description: Modules for importing hdf5 files into opendx
ConfigureParams: --with-hdf5-incdir=%p/include --datadir=%p/share/dx
InstallScript: <<
make install DESTDIR=%d
<<
DescDetail: <<
The package contains two OpenDX modules:
The ImportHDF5Field module imports a field or a slab of a field from an HDF5
file. The field can be either scalar or vector and must be described on a
regular grid. The ImportHDF5Species module imports from an HDF5 file particles
which satisfy the user's conditions.
<<
DescUsage:<<
The script %p/bin/dxhd5 automatically loads the hdf5 module description files.
Sample nets are located in %p/share/dx/samples/moduleTryOut. Run dx from
that directory-- certain sample filenames are hard coded into the sample
programs.
<<
DescPort:<<
Changed the install locations to comply with fink. Rewrote some of the scripts
to take advantage of these new locations.
<<
License: Restrictive/Distributable
Maintainer: Jeremy Erwin <[EMAIL PROTECTED]>
Homepage: http://www-beams.colorado.edu/dxhdf5/
Index: dx.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/dx.info,v
retrieving revision 1.3
retrieving revision 1.3.2.1
diff -u -d -r1.3 -r1.3.2.1
--- dx.info 1 Jun 2006 22:34:46 -0000 1.3
+++ dx.info 30 Apr 2007 02:48:27 -0000 1.3.2.1
@@ -1,11 +1,11 @@
Package: dx
-Version: 4.4.0
+Version: 4.4.4
Revision: 1000
Source: http://opendx.npaci.edu/source/%n-%v.tar.gz
-Source-MD5: 8fe6a09faea4aa713a1540f51371b719
+Source-MD5: 6da0c4cd21d3c08f97b7662e3aee5b7b
Patch: %n.patch
-BuildDepends: openmotif3 (>= 2.2.3-11), libtiff (>= 3.7.2-1001), netcdf (>=
3.6.1-1001), automake1.7, libtool14, imagemagick-dev (>= 6.1.8-1003), x11-dev
-Depends: openmotif3-shlibs (>= 2.2.3-11), imagemagick (>= 6.1.8-1003),
netcdf-shlibs (>= 3.6.1-1001), libtiff-shlibs (>= 3.7.2-1001), hdf (>=
4.2r1-1001), x11
+BuildDepends: openmotif3 (>= 2.2.3-11), libtiff (>= 3.7.2-1001), netcdf (>=
3.6.1-1001), automake1.7, libtool14, imagemagick-dev (>= 6.1.8-1002),
x11-dev,lcms,libpng3,libxml2
+Depends: openmotif3-shlibs (>= 2.2.3-11), imagemagick-shlibs (>= 6.1.8-1003),
netcdf-shlibs (>= 3.6.1-1001), libtiff-shlibs (>= 3.7.2-1001), hdf (>=
4.2r1-1001),
x11,libiconv,lcms-shlibs,libpng3-shlibs,libtool14-shlibs,libxml2-shlibs
ConfigureParams: --prefix=%p/share --exec_prefix=%p --with-motif-libs=%p/lib
--with-motif-includes=%p/include --without-javadx --with-large-arenas
GCC:4.0
SetCXX:g++-4.0
@@ -24,10 +24,6 @@
<<
DocFiles: <<
LICENSE NEWS README doc/README COPYING doc/README_SMP
-doc/README_alphax doc/README_aviion doc/README_hp700
-doc/README_ibm6000 doc/README_ibmpvs doc/README_indigo
-doc/README_intelnt doc/README_sgi doc/README_sgi4 doc/README_solaris
-doc/README_sun4
<<
License: OSI-Approved
Description: Open Visualization Data Explorer
@@ -52,9 +48,6 @@
in %p/bin, %p/include, %p/share/man etc. Using %p/lib breaks things, so
I've left the "libraries" in %/p/share/dx/lib.
Disables java dx.
-During compilation, the build will seem to hang. zClipQ.C is resistant to
-aggressive optimization. On my G4/1.25, compilation of this file may take
-up to thirty minutes.
Fixed the -morehelp option.
Now uses openmotif3, as lesstif doesn't render some widgets correctly.
Corrected configure.ac so all necesary hdf libaries are compiled in.
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