Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory sc8-pr-cvs17.sourceforge.net:/tmp/cvs-serv1611
Modified Files:
emboss.info emboss.patch
Log Message:
upstream bugfixes
Index: emboss.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/emboss.patch,v
retrieving revision 1.10
retrieving revision 1.11
diff -u -d -r1.10 -r1.11
--- emboss.patch 20 Jan 2008 13:32:07 -0000 1.10
+++ emboss.patch 9 Mar 2008 21:38:09 -0000 1.11
@@ -25,8 +25,42 @@
diff -Naur EMBOSS-5.0.0/ajax/ajindex.c EMBOSS-5.0.0-patched/ajax/ajindex.c
--- EMBOSS-5.0.0/ajax/ajindex.c 2007-07-06 08:18:48.000000000 -0400
-+++ EMBOSS-5.0.0-patched/ajax/ajindex.c 2008-01-09 13:50:33.000000000
-0500
-@@ -2516,7 +2516,14 @@
++++ EMBOSS-5.0.0-patched/ajax/ajindex.c 2008-03-06 05:47:31.000000000
-0500
+@@ -1364,7 +1364,7 @@
+ {
+ id = bucket->Ids[i];
+ len = BT_BUCKIDLEN(id->id);
+- if((lptr-buf+1)+len > cache->pagesize) /* overflow */
[...1772 lines suppressed...]
++
++
++/* @func embIndexExit
**********************************************************
++**
++** Cleanup indexing internals on exit
++**
++** @return [void]
++******************************************************************************/
++
++void embIndexExit(void)
++{
++ ajStrDel(&embindexLine);
++ ajStrDel(&embindexToken);
++ ajStrDel(&embindexTstr);
++ ajStrDel(&embindexPrefix);
++ ajStrDel(&embindexFormat);
++ ajStrTokenDel(&embindexHandle);
++
++ return;
++}
Index: emboss.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/emboss.info,v
retrieving revision 1.21
retrieving revision 1.22
diff -u -d -r1.21 -r1.22
--- emboss.info 20 Jan 2008 13:32:07 -0000 1.21
+++ emboss.info 9 Mar 2008 21:38:09 -0000 1.22
@@ -1,6 +1,6 @@
Package: emboss
Version: 5.0.0
-Revision: 6
+Revision: 7
#Distribution: 10.4
Depends: %N-ajax5-shlibs (>= %v-%r), %N-nucleus5-shlibs (>= %v-%r),
%N-plplot5-shlibs (>= %v-%r), x11, x11-shlibs, libpng3-shlibs, libjpeg-shlibs,
gd2-shlibs, system-java14
BuildDepends: libpng3, libjpeg, gd2, libiconv-dev, x11-dev, system-java14-dev
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