Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory sc8-pr-cvs17.sourceforge.net:/tmp/cvs-serv24768
Modified Files:
emboss.info
Log Message:
move to stable
Index: emboss.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/emboss.info,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -d -r1.6 -r1.7
--- emboss.info 13 Oct 2007 17:22:58 -0000 1.6
+++ emboss.info 22 Jul 2008 09:55:06 -0000 1.7
@@ -1,49 +1,43 @@
Package: emboss
-Version: 4.1.0
-Revision: 4
-Distribution: 10.4
-Depends: %N-ajax4-shlibs (>= %v-%r), %N-nucleus4-shlibs (>= %v-%r),
%N-plplot5-shlibs (>= %v-%r), x11, libpng3-shlibs, libjpeg-shlibs, gd2-shlibs,
system-java14
-BuildDepends: libpng3, libjpeg, gd2, libiconv-dev, x11-dev, system-java14-dev
-#Replaces: emboss (<< 2.7.1-2)
+Version: 5.0.0
+Revision: 8
+#Distribution: 10.4
+Depends: %N-ajax5-shlibs (>= %v-%r), %N-nucleus5-shlibs (>= %v-%r),
%N-plplot5-shlibs (>= %v-%r), x11, x11-shlibs, libpng3-shlibs, libjpeg-shlibs,
gd2-shlibs, system-java14
+BuildDepends: libpng3, libjpeg, gd2, libiconv-dev, x11-dev, system-java14-dev,
freetype219
+#Replaces: emboss (<< 5.0.0)
Source: mirror:custom:EMBOSS-%v.tar.gz
CustomMirror: <<
- Primary: ftp://emboss.open-bio.org/pub/EMBOSS/old/%v/
+ Primary: ftp://emboss.open-bio.org/pub/EMBOSS/
<<
-Source-MD5: a08ed3834eb249162196df7ab889fd4c
-SetCPPFLAGS: -Dstat64=stat
+Source-MD5: be4c895220ad34afd65d450ba7d8e34b
+#SetCPPFLAGS: -Dstat64=stat
Patch: %n.patch
-PatchScript: <<
- perl -pi -e 's,([<"])(pcre)(.*.h[>"]),\1EMBOSS/\2\3,' ajax/*
- perl -pi -e 's,(pcre\S*\.h),EMBOSS/\1,g' ajax/Makefile.in
- mkdir ajax/EMBOSS
- mv ajax/pcre*.h ajax/EMBOSS
-<<
ConfigureParams:
--with-java=/System/Library/Frameworks/JavaVM.framework/Versions/1.4.2/Home
--with-javaos=/System/Library/Frameworks/JavaVM.framework/Versions/1.4.2/Home/include
--disable-dependency-tracking --libdir=%p/lib/EMBOSS
Installscript: <<
make install DESTDIR=%d
mkdir -p %i/include/EMBOSS
mv %i/include/*.* %i/include/EMBOSS/
- ln -s EMBOSS/lib{ajax,ajaxg,nucleus,plplot}.dylib %i/lib
+ ln -s EMBOSS/lib{ajax,ajaxg,nucleus,eplplot}.dylib %i/lib
mv %i/lib/EMBOSS/*.*a %i/lib
<<
SplitOff10: <<
- Package: %N-ajax4-shlibs
+ Package: %N-ajax5-shlibs
Depends: %N-plplot5-shlibs (>= %v-%r), libpng3-shlibs, libjpeg-shlibs,
gd2-shlibs, libiconv
DocFiles: ChangeLog COPYING README
Files: <<
- lib/EMBOSS/libajax.4*.dylib
- lib/EMBOSS/libajaxg.4*.dylib
+ lib/EMBOSS/libajax.5*.dylib
+ lib/EMBOSS/libajaxg.5*.dylib
<<
Shlibs: <<
- %p/lib/EMBOSS/libajax.4.dylib 5.0.0 %n (>= 4.0.0-1)
- %p/lib/EMBOSS/libajaxg.4.dylib 5.0.0 %n (>= 4.0.0-1)
+ %p/lib/EMBOSS/libajax.5.dylib 6.0.0 %n (>= 5.0.0-3)
+ %p/lib/EMBOSS/libajaxg.5.dylib 6.0.0 %n (>= 5.0.0-3)
<<
<<
SplitOff11: <<
- Package: %N-ajax4-dev
- Depends: %N-ajax4-shlibs (= %v-%r)
- Conflicts: %N-dev
+ Package: %N-ajax5-dev
+ Depends: %N-ajax5-shlibs (= %v-%r)
+ Conflicts: %N-dev, %N-ajax4-dev
Replaces: %N-dev
DocFiles: ChangeLog COPYING README
Files: <<
@@ -56,22 +50,22 @@
<<
SplitOff20: <<
- Package: %N-nucleus4-shlibs
- Depends: %N-ajax4-shlibs (>= %v-%r)
- Replaces: %N (<< 4.0.0-1)
+ Package: %N-nucleus5-shlibs
+ Depends: %N-ajax5-shlibs (>= %v-%r)
+ Replaces: %N (<< 5.0.0-3)
DocFiles: ChangeLog COPYING README
Files: <<
- lib/EMBOSS/libnucleus.4*.dylib
+ lib/EMBOSS/libnucleus.5*.dylib
<<
Shlibs: <<
- %p/lib/EMBOSS/libnucleus.4.dylib 5.0.0 %n (>= 4.0.0-1)
+ %p/lib/EMBOSS/libnucleus.5.dylib 6.0.0 %n (>= 5.0.0-3)
<<
<<
SplitOff21: <<
- Package: %N-nucleus4-dev
- Depends: %N-nucleus4-shlibs (= %v-%r)
- Conflicts: %N-dev
- Replaces: %N-dev, %N (<< 4.0.0-1)
+ Package: %N-nucleus5-dev
+ Depends: %N-nucleus5-shlibs (= %v-%r)
+ Conflicts: %N-dev, %N-nucleus4-dev
+ Replaces: %N-dev, %N (<< 5.0.0-3)
DocFiles: ChangeLog COPYING README
Files: <<
lib/libnucleus*
@@ -83,29 +77,26 @@
SplitOff30: <<
Package: %N-plplot5-shlibs
- Depends: libpng3-shlibs, libjpeg-shlibs, gd2-shlibs, libiconv, x11
- Replaces: %N (<< 4.0.0-1)
+ Depends: libpng3-shlibs, libjpeg-shlibs, gd2-shlibs, libiconv, x11-shlibs
+ Replaces: %N (<< 5.0.0-1)
DocFiles: ChangeLog COPYING README
Files: <<
- lib/EMBOSS/libplplot.5*.dylib
+ lib/EMBOSS/libeplplot.3*.dylib
<<
Shlibs: <<
- %p/lib/EMBOSS/libplplot.5.dylib 6.0.0 %n (>= 3.0.0-4)
+ %p/lib/EMBOSS/libeplplot.3.dylib 6.0.0 %n (>= 3.0.0-4)
<<
<<
SplitOff31: <<
Package: %N-plplot5-dev
Depends: %N-plplot5-shlibs (= %v-%r)
- Conflicts: %N-dev
- Replaces: %N-dev, %N (<< 4.0.0-1)
+ Conflicts: %N-dev, %N-plplot5-dev (<< 5.0.0-3)
+ Replaces: %N-dev, %N (<< 5.0.0-1)
DocFiles: ChangeLog COPYING README
Files: <<
- lib/libplplot*
- lib/EMBOSS/libplplot*
- include/EMBOSS/drivers.h
- include/EMBOSS/metadefs.h
- include/EMBOSS/pdf.h
- include/EMBOSS/pl*.h
+ lib/libeplplot*
+ lib/EMBOSS/libeplplot*
+ include/eplplot/*.h
<<
BuildDependsOnly: True
<<
@@ -116,7 +107,7 @@
<<
DocFiles: <<
- AUTHORS ChangeLog COMPAT COPYING FAQ KNOWN_BUGS LICENSE NEWS README THANKS
+ AUTHORS ChangeLog COMPAT COPYING FAQ INSTALL KNOWN_BUGS LICENSE NEWS ONEWS
PROBLEMS README THANKS
<<
Description: Molecular Biology Open Software Suite
DescDetail: <<
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