Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv19480/stable/main/finkinfo/sci
Modified Files:
atlas.info
Added Files:
atlas-10.5.info
Log Message:
sync to stable
--- NEW FILE: atlas-10.5.info ---
Package: atlas
Version: 3.9.11
Revision: 1
Distribution: 10.5
Description: Portably optimal linear algebra software
DescDetail: <<
The current version provides a complete BLAS and LAPACK API.
For many operations, ATLAS achieves performance on par
with machine-specific tuned libraries.
Installs also LAPACK's docs and manpages.
Headers: cblas.h clapack.h, plus the atlas headers
Libraries installed:
liblapack.a : The LAPACK routines provided by ATLAS,
plus the rest of LAPACK from netlib.org.
libcblas_unthreaded.a : The ANSI C interface to the BLAS.
libf77blas_unthreaded.a : The Fortran77 interface to the BLAS.
libatlas.a : The main ATLAS library,
providing low-level routines for all interface libs.
Plus on multiprocessor machines the threaded variants libptcblas.a and
libptf77blas.a.
libcblas.a and libf77blas.a are symlinks pointing to the threaded versions
if available, else to the unthreaded versions.
The dylibs for latlas lcblas lf77bas and llapack are also installed
<<
DescPort: <<
The optimized subset of LAPACK provided by ATLAS is merged
with the full LAPACK from http://www.netlib.org/lapack.
Still doesn't build on (some ?) G4's.
<<
DescUsage: <<
Order is important when linking! Use:
-L%p/lib -llapack -lcblas -lf77blas -latlas
<<
Source: mirror:sourceforge:math-atlas/%n%v.tar.bz2
Source-MD5: fa95dfd4a69e5614db1061a740bc5265
Source2: http://www.netlib.org/lapack/lapack-3.1.1.tgz
Source2-MD5: 00b21551a899bcfbaa7b8443e1faeef9
SourceDirectory: ATLAS
License: BSD
# since we're experimenting with building a dylib :
BuildDependsOnly: true
BuildDepends: gcc44
PatchScript: <<
#!/bin/sh -ev
sed -i.bak -e '/PowerBook/,/RackMac/s,"c,"k,g'
CONFIG/src/backend/archinfo_freebsd.c
cd ..; ln -s lapack-3.1.1 LAPACK
cd LAPACK
sed -e 's,\.\./\.\./blas\$(PLAT)\.a,%b/../bld/lib/libf77blas.a
%b/../bld/lib/libcblas.a %b/../bld/lib/libatlas.a,' \
-e 's|g77|gfortran|g' -e 's,^TIMER,\#TIMER,' -e '/INT_ETIME/s,^\# *,,' <
INSTALL/make.inc.LINUX > make.inc
<<
CompileScript: <<
#!/bin/sh -ev
cflags=''
if [ %m = 'i386' ]
then mflags="-mfpmath=sse -msse -msse2 -msse3 -m32";
iflags="-mfpmath=387"
else mflags=''; iflags=''
if [ `machine|sed -e 's,ppc,,' -e 's,\([0-9]\).*,\1,'` != 9 ]
then cflags='-Si cputhrchk 0 -D c -DATL_AVgcc'
fi
fi
lflags="-fPIC -O3 -fomit-frame-pointer -fgcse-sm -fgcse-las -ftree-loop-linear
$mflags"
iflags="-fPIC -O3 -fomit-frame-pointer $iflags"
cd ../LAPACK
sed -i.bak -e "s;\(-funroll-all-loops\) -O3;\1 $lflags;" make.inc
make lapacklib
# atlas 'forgets' scabs1 (not dcabs1 !), so we get it here..
cd BLAS/SRC; make scabs1.o; cd -
mkdir -p ../bld/lib
ar cr ../bld/lib/libf77blas.a BLAS/SRC/scabs1.o; ar cr
../bld/lib/libptf77blas.a BLAS/SRC/scabs1.o
cd ..
ln -s %p/bin/gcc-4 gcc
export PATH=`pwd`:$PATH
cd bld
if [ %m = 'x86_64' ]
then ../ATLAS/configure -v 2 --prefix=%p
--with-netlib-lapack=%b/../LAPACK/lapack_LINUX.a -b 64 -F ic "$iflags" -F if
"$iflags" $cflags
else ../ATLAS/configure -v 2 --prefix=%p
--with-netlib-lapack=%b/../LAPACK/lapack_LINUX.a -b 32 -F ic "$iflags" -F if
"$iflags" $cflags
fi
make
cd lib
# Apparently on some machines (=monoprocesors ?) the threaded libs are not
made;
# we first make atlas 'look the same' to all other pkgs, independently of the
machine
if test -f libptcblas.a
then for C in c f77; do
mv lib${C}blas.a lib${C}blas_unthreaded.a
ln -s libpt${C}blas.a lib${C}blas.a
done
else rm libptf77blas.a # This is then the embryo we created
with scabs1 above
for C in c f77; do ln -s lib${C}blas.a lib${C}blas_unthreaded.a;
done
fi
# We now make shared libs (experimental); easier to just write the commands
here than to fix lib/Makefile ...
# We link 'manually', with ld, to avoid having unnecessary libs like lgcc_s
among the load commands.
# This way the libs can be safely used in linking with any compiler: they will
not bring themselves
# the wrong lgcc_s in the search list.
ld="ld -dynamic -dylib -single_module -dead_strip -x -all_load -L.
-L%p/lib/gcc4.4/lib -ldylib1.o -dylib_install_name"
$ld %p/lib/libatlas.dylib libatlas.a -o libatlas.dylib -lSystem
$ld %p/lib/libcblas.dylib libcblas.a -o libcblas.dylib -latlas -lSystem
$ld %p/lib/libf77blas.dylib libf77blas.a -o libf77blas.dylib -lgfortran
-latlas -lSystem
$ld %p/lib/liblapack.dylib liblapack.a -o liblapack.dylib -lf77blas -lgfortran
-lcblas -latlas -lgcc_s.1 -lSystem
## the next 4 lines are optional _ no idea of a correct exported symbols list
for libatlas...
## probably to be removed for a commit _ it gains an enormous decrease in the
# of symbols exported by the lib,
## but size goes down only from ~ 2.8M to 2.3M
# nm -mfgu liblapack.dylib libcblas.dylib libf77blas.dylib|fgrep ' (from
libatlas'|sed -e 's, (from .*,,' -e 's,.* ,,'|sort -u > lst
# install_name_tool -id %p/lib/libatlas_full.dylib libatlas.dylib
# mv libatlas.dylib libatlas_full.dylib
# $ld %p/lib/libatlas.dylib libatlas.a -o libatlas.dylib -ldylib1.o -lSystem
-exported_symbols_list lst
<<
InfoTest: <<
TestScript: <<
#!/bin/sh -ev
cd ../LAPACK
mv lapack_LINUX.a lapack_LINUX.a~; ln -s ../bld/lib/liblapack.a lapack_LINUX.a
## first getting around an internal compiler error with gcc4.3.1 :
mv make.inc make.inc~
sed 's, -ftree-loop-linear,,' < make.inc~ > make.inc
cd TESTING/EIG
make cget35.o zget35.o
cd -
mv make.inc~ make.inc
##
make -k lapack_testing blas_testing || :
# to get timing uncluttered by compilation times, we'll repeat the tests at
the end of the log:
rm {BLAS,TESTING}/*.out
cd ../bld
if test -f libptcblas.a
then make -k test pttest time
else make -k test time
fi
cd ../LAPACK
time { make -k blas_testing; cd TESTING; make -k ; } || :
# here: real 3m10.903s; user 2m55.622s; sys 0m15.570s (average of 3)
<<
<<
InstallScript: <<
#!/bin/sh -ev
mkdir -p %i/share/doc/%n/LAPACK
cp doc/* README %i/share/doc/%n
head -n29 bin/atlas_tee.c > %i/share/doc/%n/LICENSE
cp -pPR ../LAPACK/manpages/{blas/,}man %i/share
cp -pPR ../LAPACK/{html,COPYING,README} %i/share/doc/%n/LAPACK
ln -s html/index.html %i/share/doc/%n/LAPACK
cd ../bld
make install DESTDIR=%i
cp -pPR lib/*.{a,dylib} %i/lib
rm %i/lib/libtstatlas.a
find %i/lib -type f -name '*.a' -exec ranlib \{\} \;
chmod -R a+rX %i/share
<<
Splitoff: <<
Package: %N-shlibs
Depends: gcc44-shlibs
Files: lib/*.dylib
InstallScript: mkdir -p %i/share/doc; ln -s %N %i/share/doc/%n
Shlibs: <<
%p/lib/liblapack.dylib 0.0.0 %n (>= 3.8.0-6)
%p/lib/libcblas.dylib 0.0.0 %n (>= 3.8.0-6)
%p/lib/libf77blas.dylib 0.0.0 %n (>= 3.8.0-6)
%p/lib/libatlas.dylib 0.0.0 %n (>= 3.8.0-6)
<<
<<
SplitOff2: <<
Package: %N-doc
Files: share/man share/doc/%N/LAPACK
InstallScript: mkdir -p %i/share/doc; ln -s %N %i/share/doc/%n
<<
Homepage: http://math-atlas.sourceforge.net
Maintainer: None <[email protected]>
Index: atlas.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/atlas.info,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -d -r1.5 -r1.6
--- atlas.info 12 Feb 2010 21:30:27 -0000 1.5
+++ atlas.info 4 Oct 2011 22:24:34 -0000 1.6
@@ -1,6 +1,7 @@
Package: atlas
Version: 3.9.11
-Revision: 1
+Revision: 11
+Distribution: 10.6
Description: Portably optimal linear algebra software
DescDetail: <<
The current version provides a complete BLAS and LAPACK API.
@@ -91,7 +92,10 @@
# We link 'manually', with ld, to avoid having unnecessary libs like lgcc_s
among the load commands.
# This way the libs can be safely used in linking with any compiler: they
will not bring themselves
# the wrong lgcc_s in the search list.
- ld="ld -dynamic -dylib -single_module -dead_strip -x -all_load -L.
-L%p/lib/gcc4.4/lib -ldylib1.o -dylib_install_name"
+ if [ %m = 'i386' ]
+ then ld="ld -arch i386 -dynamic -dylib -single_module -dead_strip -x
-all_load -L. -L%p/lib/gcc4.4/lib -ldylib1.o -dylib_install_name"
+ else ld="ld -dynamic -dylib -single_module -dead_strip -x -all_load -L.
-L%p/lib/gcc4.4/lib -ldylib1.o -dylib_install_name"
+ fi
$ld %p/lib/libatlas.dylib libatlas.a -o libatlas.dylib -lSystem
$ld %p/lib/libcblas.dylib libcblas.a -o libcblas.dylib -latlas -lSystem
$ld %p/lib/libf77blas.dylib libf77blas.a -o libf77blas.dylib -lgfortran
-latlas -lSystem
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