Hello,
Searching the internet, I came across this discussion:
--
From: Martin Costabel
Date: 2008-03-10 00:00:45
Dominique Dhumieres wrote:
>>Do you have atlas-shlibs installed? If yes, could you try if removing it
>>allows you to build r-base?
>
>
> The answer is yes to both questions.
> r-base is now installed on intel OSX 10.5.2 with gcc43.
OK, so it's again Leopard's braindead /usr/bin/ld that is to blame here.
I'll fix it in CVS, using the same dylib_file hack as in the octave package.
--
Martin
--
...I'm personally currently messing around with my own install of ATLAS,
LAPACK, and R (I love Fink and use it, but I'm interested in running the
less stable version of ATLAS which isn't out in Fink yet), and am having the
same problem Dhumieres references above:
Warning in solve.default(rgb) :
unable to load shared library \
'/Volumes/MacBook/sw/src/fink.build/r-base-2.6.0-1/R-2.6.0/modules//lapack.so':
\
dlopen(/Volumes/MacBook/sw/src/fink.build/r-base-2.6.0-1/R-2.6.0/modules//lapack.so,
\
6): Symbol not found: _cblas_cdotc_sub
Referenced from: \
...while I know this list is dedicated to Fink installs, it would be
fantastic if Martin or someone with similar knowledge could explain in a
touch more detail what the "fix" was in the current fink distro so that
those not using fink for R could benefit...specifically, what the fix is or
how it was accomplished. I have verified in a number of ways that the
_cblas_cdotc_sub is present in the lapack/atlas commands I have sent to
R...so I'm nearly certain I'm having the same problem referenced by
Dominique above.
Many thanks!
Adam Kramer
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