<AKH>: accidentally missed this one in the moderation queue.
-------------------------------------------------------------
Re: [Fink-devel] pymol in 10.7.eml
Subject:
Re: [Fink-devel] pymol in 10.7
From:
Michael Lerner <mgler...@gmail.com>
Date:
5:27 PM
To:
Koen van der Drift <koenvanderdr...@gmail.com>
CC:
None Devel <fink-devel@lists.sourceforge.net>
Newer versions of PyMOL include several modules (scipy, numpy,
matplotlib). My understanding is that this was done to make it easier to
write and support plugins and extensions. I don't know how fink does
things, but perhaps you could ship a "lite" version. You may wish to
talk with Jason Vertrees directly or on the PyMOL list.
Cheers,
-Michael
On Fri, Jul 29, 2011 at 4:16 PM, Koen van der Drift
<koenvanderdr...@gmail.com> wrote:
Hi,
I recently switched to Lion, and tried to install pymol through fink.
I noticed that the dependency on numpy has been changed into one on
scipy. Scipy pulls in a slew of additional dependencies, including
gcc46, making it an elaborate install process. As far as I know,
there is no need for pymol to depend on scipy, numpy works just fine
as I tested on my local machine. I already contacted the maintainer,
but he was not involved in the move of pymol into 10.7.
Cheers,
- Koen.
--
Michael Lerner, Ph.D.
IRTA Postdoctoral Fellow
Laboratory of Computational Biology NIH/NHLBI
5635 Fishers Lane, Room T909, MSC 9314
Rockville, MD 20852 (UPS/FedEx/Reality)
Bethesda MD 20892-9314 (USPS)
as of August 15th:
Department of Physics and Astronomy
Earlham College
801 National Road West
Richmond, IN 47374-4095
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