On 10/19/14, 4:16 AM, Xiaoguang Xue wrote: > Hi, when I installed pymol-py27 and apbs packages on OS X 10.10, I got > an error about gcc. Any help would be appreciated! > > .... > > make[3]: Leaving directory > `/sw/src/fink.build/gcc49-4.9.1-1000/darwin_objdir/gcc' > > mkdir x86_64-apple-darwin14.0.0/libgcc > > Checking multilib configuration for libgcc... > > Configuring stage 1 in x86_64-apple-darwin14.0.0/libgcc > > configure: creating cache ./config.cache > > checking build system type... x86_64-apple-darwin14.0.0 > > checking host system type... x86_64-apple-darwin14.0.0 > > checking for --enable-version-specific-runtime-libs... no > > checking for a BSD-compatible install... /sw/bin/ginstall -c > > checking for gawk... awk > > checking for x86_64-apple-darwin14.0.0-ar... ar > > checking for x86_64-apple-darwin14.0.0-lipo... lipo > > checking for x86_64-apple-darwin14.0.0-nm... > /sw/src/fink.build/gcc49-4.9.1-1000/darwin_objdir/./gcc/nm > > checking for x86_64-apple-darwin14.0.0-ranlib... ranlib > > checking for x86_64-apple-darwin14.0.0-strip... strip > > checking whether ln -s works... yes > > checking for x86_64-apple-darwin14.0.0-gcc... > /sw/src/fink.build/gcc49-4.9.1-1000/darwin_objdir/./gcc/xgcc > -B/sw/src/fink.build/gcc49-4.9.1-1000/darwin_objdir/./gcc/ > -B/sw/lib/gcc4.9/x86_64-apple-darwin14.0.0/bin/ > -B/sw/lib/gcc4.9/x86_64-apple-darwin14.0.0/lib/ -isystem > /sw/lib/gcc4.9/x86_64-apple-darwin14.0.0/include -isystem > /sw/lib/gcc4.9/x86_64-apple-darwin14.0.0/sys-include > > checking for suffix of object files... configure: error: in > `/sw/src/fink.build/gcc49-4.9.1-1000/darwin_objdir/x86_64-apple-darwin14.0.0/libgcc': > > configure: error: cannot compute suffix of object files: cannot compile > > See `config.log' for more details. > > make[2]: *** [configure-stage1-target-libgcc] Error 1 > > make[2]: Leaving directory > `/sw/src/fink.build/gcc49-4.9.1-1000/darwin_objdir' > > make[1]: *** [stage1-bubble] Error 2 > > make[1]: Leaving directory > `/sw/src/fink.build/gcc49-4.9.1-1000/darwin_objdir' > > make: *** [bootstrap-lean] Error 2 > > ### execution of /tmp/fink.7K4ps failed, exit code 2 > > ### execution of /tmp/fink.WHw3V failed, exit code 2 > > Removing runtime build-lock... > > Removing build-lock package... > > /sw/bin/dpkg-lockwait -r fink-buildlock-gcc49-4.9.1-1000 > > (Reading database ... 22141 files and directories currently installed.) > > Removing fink-buildlock-gcc49-4.9.1-1000 ... > > Failed: phase compiling: gcc49-4.9.1-1000 failed > > .... > > Also include the following system information: > > Package manager version: 0.38.0 > > Distribution version: selfupdate-rsync Sun Oct 19 13:00:35 2014, 10.10, > x86_64 > > Trees: local/main stable/main stable/crypto > > Xcode.app: 6.0.1 > > Xcode command-line tools: 6.1.0.0.1.1413057044 > > Max. Fink build jobs: 4 > > > > -- > Xiaoguang Xue, PhD student > Utrecht University > Crystal & Structural Chemistry > Padualaan 8. Room N807 > 3584 CH Utrecht > The Netherlands > Tel. +31-30-253-2383 > >
You might try using the gcc49 packages from the 10.9 binary distribution. You can download them manually from http://bindist.finkmirrors.net/10.9/dists/stable/main/binary-darwin-x86_64/devel/ Or you can enable the 10.9 distribution by following the "10.9" instructions on that page--this will be treated as a "local" modification, so add the "deb" line in an appropriate place in your /sw/etc/apt/sources.list. -- Alexander Hansen, Ph.D. Fink User Liaison My package updates: http://finkakh.wordpress.com/ ------------------------------------------------------------------------------ Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://p.sf.net/sfu/Zoho _______________________________________________ Fink-devel mailing list Fink-devel@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.apple.fink.devel Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-devel
